Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-5A0A075B621 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-5A0A075B621 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav6n-5A0A075B621 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-5A0A075B621 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-5A0A075B621 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-5A0A075B621 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-5A0A075B621 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-5A0A075B621 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav6n-5A0A075B621 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Trav6n-5A0A075B621 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-5A0A075B621 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-5A0A075B621 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav6n-5A0A075B621 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav6n-5A0A075B621 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.79□□□□□ -0.36
Trav6n-5A0A075B621 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav6n-5A0A075B621 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-5A0A075B621 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6n-5A0A075B621 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav6n-5A0A075B621 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6n-5A0A075B621 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6n-5A0A075B621 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6n-5A0A075B621 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6n-5A0A075B621 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6n-5A0A075B621 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6n-5A0A075B621 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6n-5A0A075B621 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.77□□□□□ -0.36
Trav6n-5A0A075B621 Gm15375-201ENSMUST00000119510 849 ntBASIC12.77□□□□□ -0.37
Trav6n-5A0A075B621 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6n-5A0A075B621 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6n-5A0A075B621 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav6n-5A0A075B621 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav6n-5A0A075B621 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.77□□□□□ -0.37
Trav6n-5A0A075B621 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6n-5A0A075B621 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6n-5A0A075B621 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6n-5A0A075B621 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav6n-5A0A075B621 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav6n-5A0A075B621 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6n-5A0A075B621 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6n-5A0A075B621 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6n-5A0A075B621 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6n-5A0A075B621 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6n-5A0A075B621 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6n-5A0A075B621 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6n-5A0A075B621 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6n-5A0A075B621 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav6n-5A0A075B621 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6n-5A0A075B621 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms