Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4n-4A0A075B615 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4n-4A0A075B615 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.47□□□□□ -0.57
Trav4n-4A0A075B615 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4n-4A0A075B615 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4n-4A0A075B615 Gm42473-201ENSMUST00000201056 2291 ntBASIC11.47□□□□□ -0.57
Trav4n-4A0A075B615 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4n-4A0A075B615 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav4n-4A0A075B615 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4n-4A0A075B615 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav4n-4A0A075B615 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4n-4A0A075B615 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav4n-4A0A075B615 Gm38285-201ENSMUST00000192928 922 ntBASIC11.47□□□□□ -0.57
Trav4n-4A0A075B615 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav4n-4A0A075B615 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Trav4n-4A0A075B615 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4n-4A0A075B615 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4n-4A0A075B615 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4n-4A0A075B615 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav4n-4A0A075B615 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4n-4A0A075B615 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4n-4A0A075B615 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4n-4A0A075B615 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4n-4A0A075B615 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav4n-4A0A075B615 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav4n-4A0A075B615 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav4n-4A0A075B615 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav4n-4A0A075B615 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav4n-4A0A075B615 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav4n-4A0A075B615 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav4n-4A0A075B615 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav4n-4A0A075B615 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav4n-4A0A075B615 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav4n-4A0A075B615 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav4n-4A0A075B615 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav4n-4A0A075B615 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav4n-4A0A075B615 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav4n-4A0A075B615 Gm13401-201ENSMUST00000117074 291 ntBASIC11.46□□□□□ -0.57
Trav4n-4A0A075B615 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav4n-4A0A075B615 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Trav4n-4A0A075B615 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav4n-4A0A075B615 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav4n-4A0A075B615 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav4n-4A0A075B615 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav4n-4A0A075B615 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav4n-4A0A075B615 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav4n-4A0A075B615 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav4n-4A0A075B615 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav4n-4A0A075B615 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trav4n-4A0A075B615 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
Trav4n-4A0A075B615 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav4n-4A0A075B615 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav4n-4A0A075B615 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav4n-4A0A075B615 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav4n-4A0A075B615 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav4n-4A0A075B615 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms