Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Gm11249-201ENSMUST00000117071 859 ntBASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-6A0A075B603 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Asic1-205ENSMUST00000228185 1818 ntBASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Gm15039-201ENSMUST00000118914 875 ntBASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-6A0A075B603 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms