Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Dancr-204ENSMUST00000132389 2347 ntBASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav9-1A0A075B601 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Gm3375-201ENSMUST00000203929 796 ntBASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav9-1A0A075B601 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-1A0A075B601 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
Trav9-1A0A075B601 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-1A0A075B601 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav9-1A0A075B601 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-1A0A075B601 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-1A0A075B601 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-1A0A075B601 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.86□□□□□ -0.35
Trav9-1A0A075B601 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.86□□□□□ -0.35
Trav9-1A0A075B601 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav9-1A0A075B601 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav9-1A0A075B601 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-1A0A075B601 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-1A0A075B601 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav9-1A0A075B601 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-1A0A075B601 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-1A0A075B601 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-1A0A075B601 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-1A0A075B601 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-1A0A075B601 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav9-1A0A075B601 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9-1A0A075B601 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav9-1A0A075B601 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9-1A0A075B601 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9-1A0A075B601 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
Trav9-1A0A075B601 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav9-1A0A075B601 Gm27011-201ENSMUST00000182352 972 ntBASIC12.85□□□□□ -0.35
Trav9-1A0A075B601 Odf3b-204ENSMUST00000227834 930 ntBASIC12.85□□□□□ -0.35
Trav9-1A0A075B601 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9-1A0A075B601 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav9-1A0A075B601 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9-1A0A075B601 Gm10812-201ENSMUST00000099864 546 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms