Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 Gm38027-201ENSMUST00000192315 235 ntBASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-1A0A075B5Z8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-1A0A075B5Z8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav6-1A0A075B5Z8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-1A0A075B5Z8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Trav6-1A0A075B5Z8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Trav6-1A0A075B5Z8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-1A0A075B5Z8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-1A0A075B5Z8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Trav6-1A0A075B5Z8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-1A0A075B5Z8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-1A0A075B5Z8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-1A0A075B5Z8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-1A0A075B5Z8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav6-1A0A075B5Z8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-1A0A075B5Z8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-1A0A075B5Z8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav6-1A0A075B5Z8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-1A0A075B5Z8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav6-1A0A075B5Z8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-1A0A075B5Z8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-1A0A075B5Z8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms