Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 RPS29P7-201ENST00000439662 171 ntBASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 RPS26P30-201ENST00000443431 335 ntBASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 AC078785.3-201ENST00000476607 425 ntBASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 RPL7P47-201ENST00000497299 556 ntBASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 HMGB3P15-201ENST00000507326 574 ntBASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 MIR5685-201ENST00000579080 79 ntBASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 AC011468.4-201ENST00000603942 409 ntBASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 AC067959.1-201ENST00000604334 379 ntBASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 AC079791.1-201ENST00000605356 973 ntBASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 RNU1-30P-201ENST00000606575 163 ntBASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 AL118508.4-201ENST00000624142 1176 ntBASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 AC112200.1-201ENST00000625015 234 ntBASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 ZNF37BP-203ENST00000452306 1352 ntBASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 AL359893.1-201ENST00000447628 1580 ntBASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LRRC40Q9H9A6 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 MIR525-201ENST00000384978 85 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 RNU6-328P-201ENST00000390887 106 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 ATP5F1P6-201ENST00000402768 767 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 RPS20P25-201ENST00000412447 352 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 AL158825.1-201ENST00000414735 521 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 AC002075.2-201ENST00000425207 252 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 RPL7P2-201ENST00000427639 268 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 MTCO1P43-201ENST00000431831 488 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 AL645931.1-201ENST00000439737 410 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 RAB11AP1-201ENST00000442978 646 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 RPS29P31-201ENST00000446147 164 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 Z99714.1-201ENST00000450463 807 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 RNU7-170P-201ENST00000459303 61 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 SYPL1P1-201ENST00000473622 768 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 RNF138P1-201ENST00000502765 546 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 IGKV2D-36-201ENST00000518643 226 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 AP000926.4-201ENST00000527351 454 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 OR5AP1P-201ENST00000529730 940 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 MTND5P21-201ENST00000531961 522 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 HSPE1P5-201ENST00000561489 272 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 MIR4738-201ENST00000579134 87 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 MIR3690-201ENST00000580266 75 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 AC112503.2-201ENST00000609005 552 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 AC096586.1-201ENST00000610267 561 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 RMST_10.1-201ENST00000616309 154 ntBASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
LRRC40Q9H9A6 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
LRRC40Q9H9A6 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LRRC40Q9H9A6 AP001148.1-201ENST00000624124 2359 ntBASIC3.69□□□□□ -1.82
LRRC40Q9H9A6 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
LRRC40Q9H9A6 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LRRC40Q9H9A6 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LRRC40Q9H9A6 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
LRRC40Q9H9A6 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LRRC40Q9H9A6 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LRRC40Q9H9A6 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
LRRC40Q9H9A6 RNU6-1151P-201ENST00000384684 107 ntBASIC3.69□□□□□ -1.82
LRRC40Q9H9A6 AL121972.1-201ENST00000402023 252 ntBASIC3.69□□□□□ -1.82
LRRC40Q9H9A6 UBE2V1P15-201ENST00000407776 448 ntBASIC3.69□□□□□ -1.82
LRRC40Q9H9A6 SNORA57.3-201ENST00000411095 141 ntBASIC3.69□□□□□ -1.82
LRRC40Q9H9A6 RN7SKP263-201ENST00000411194 309 ntBASIC3.69□□□□□ -1.82
LRRC40Q9H9A6 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.69□□□□□ -1.82
LRRC40Q9H9A6 AC127526.1-201ENST00000417526 366 ntBASIC3.69□□□□□ -1.82
LRRC40Q9H9A6 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.69□□□□□ -1.82
LRRC40Q9H9A6 TOMM22P1-201ENST00000418578 312 ntBASIC3.69□□□□□ -1.82
LRRC40Q9H9A6 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms