Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP47Q96K76 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.38□□□□□ -1.71
USP47Q96K76 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
USP47Q96K76 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP47Q96K76 ANKRD36P1-201ENST00000344424 659 ntBASIC4.38□□□□□ -1.71
USP47Q96K76 RNU1-140P-201ENST00000365040 165 ntBASIC4.38□□□□□ -1.71
USP47Q96K76 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP47Q96K76 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.38□□□□□ -1.71
USP47Q96K76 RNA5SP107-201ENST00000411358 122 ntBASIC4.38□□□□□ -1.71
USP47Q96K76 AC008065.1-201ENST00000428525 348 ntBASIC4.38□□□□□ -1.71
USP47Q96K76 MTND2P2-201ENST00000434633 945 ntBASIC4.38□□□□□ -1.71
USP47Q96K76 AC239809.1-201ENST00000450470 217 ntBASIC4.38□□□□□ -1.71
USP47Q96K76 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.38□□□□□ -1.71
USP47Q96K76 C1DP3-201ENST00000455013 423 ntBASIC4.38□□□□□ -1.71
USP47Q96K76 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.38□□□□□ -1.71
USP47Q96K76 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.38□□□□□ -1.71
USP47Q96K76 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.38□□□□□ -1.71
USP47Q96K76 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.38□□□□□ -1.71
USP47Q96K76 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.38□□□□□ -1.71
USP47Q96K76 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.38□□□□□ -1.71
USP47Q96K76 RMST_5.1-201ENST00000618704 126 ntBASIC4.38□□□□□ -1.71
USP47Q96K76 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.38□□□□□ -1.71
USP47Q96K76 AP002967.1-201ENST00000624203 539 ntBASIC4.38□□□□□ -1.71
USP47Q96K76 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
USP47Q96K76 MTND5P24-201ENST00000438892 1767 ntBASIC4.38□□□□□ -1.71
USP47Q96K76 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
USP47Q96K76 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP47Q96K76 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.37□□□□□ -1.71
USP47Q96K76 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USP47Q96K76 ELL2P4-201ENST00000446870 1376 ntBASIC4.37□□□□□ -1.71
USP47Q96K76 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.37□□□□□ -1.71
USP47Q96K76 AC004944.1-201ENST00000517807 3059 ntBASIC4.37□□□□□ -1.71
USP47Q96K76 SNORA68.2-201ENST00000391263 128 ntBASIC4.37□□□□□ -1.71
USP47Q96K76 AC007899.1-201ENST00000412776 775 ntBASIC4.37□□□□□ -1.71
USP47Q96K76 AC006960.1-201ENST00000419980 153 ntBASIC4.37□□□□□ -1.71
USP47Q96K76 RPL31P12-201ENST00000422587 358 ntBASIC4.37□□□□□ -1.71
USP47Q96K76 AC025750.2-201ENST00000442609 450 ntBASIC4.37□□□□□ -1.71
USP47Q96K76 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.37□□□□□ -1.71
USP47Q96K76 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.37□□□□□ -1.71
USP47Q96K76 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.37□□□□□ -1.71
USP47Q96K76 AC008885.1-201ENST00000514930 301 ntBASIC4.37□□□□□ -1.71
USP47Q96K76 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.37□□□□□ -1.71
USP47Q96K76 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.37□□□□□ -1.71
USP47Q96K76 AL590410.1-201ENST00000617925 333 ntBASIC4.37□□□□□ -1.71
USP47Q96K76 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USP47Q96K76 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP47Q96K76 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.36□□□□□ -1.71
USP47Q96K76 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
USP47Q96K76 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
USP47Q96K76 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.36□□□□□ -1.71
USP47Q96K76 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
USP47Q96K76 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
USP47Q96K76 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
USP47Q96K76 RNU6-7-201ENST00000364784 107 ntBASIC4.36□□□□□ -1.71
USP47Q96K76 RNU6-8-201ENST00000365467 107 ntBASIC4.36□□□□□ -1.71
USP47Q96K76 MT-TP-201ENST00000387461 68 ntBASIC4.36□□□□□ -1.71
USP47Q96K76 AL138885.1-201ENST00000405921 675 ntBASIC4.36□□□□□ -1.71
USP47Q96K76 AL031121.1-201ENST00000406553 254 ntBASIC4.36□□□□□ -1.71
USP47Q96K76 AC243772.1-201ENST00000451620 410 ntBASIC4.36□□□□□ -1.71
USP47Q96K76 RN7SL442P-201ENST00000473804 320 ntBASIC4.36□□□□□ -1.71
USP47Q96K76 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.36□□□□□ -1.71
USP47Q96K76 AC147055.1-201ENST00000509261 750 ntBASIC4.36□□□□□ -1.71
USP47Q96K76 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.36□□□□□ -1.71
USP47Q96K76 RNA5SP217-201ENST00000515959 91 ntBASIC4.36□□□□□ -1.71
USP47Q96K76 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.36□□□□□ -1.71
USP47Q96K76 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.36□□□□□ -1.71
USP47Q96K76 AL049874.4-201ENST00000557593 255 ntBASIC4.36□□□□□ -1.71
USP47Q96K76 AL033523.1-201ENST00000605153 153 ntBASIC4.36□□□□□ -1.71
USP47Q96K76 MIR7106-201ENST00000612419 65 ntBASIC4.36□□□□□ -1.71
USP47Q96K76 AL162574.2-201ENST00000614618 657 ntBASIC4.36□□□□□ -1.71
USP47Q96K76 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.36□□□□□ -1.71
USP47Q96K76 AC099506.2-201ENST00000623074 221 ntBASIC4.36□□□□□ -1.71
USP47Q96K76 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
USP47Q96K76 SRP72P2-201ENST00000344851 1979 ntBASIC4.36□□□□□ -1.71
USP47Q96K76 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.36□□□□□ -1.71
USP47Q96K76 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
USP47Q96K76 OR1S2-201ENST00000302592 978 ntBASIC4.35□□□□□ -1.71
USP47Q96K76 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
USP47Q96K76 SNORA44-201ENST00000384584 132 ntBASIC4.35□□□□□ -1.71
USP47Q96K76 UBE2V1P2-201ENST00000397758 440 ntBASIC4.35□□□□□ -1.71
USP47Q96K76 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.35□□□□□ -1.71
USP47Q96K76 AC093698.1-201ENST00000423843 571 ntBASIC4.35□□□□□ -1.71
USP47Q96K76 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.35□□□□□ -1.71
USP47Q96K76 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.35□□□□□ -1.71
USP47Q96K76 CASP3P1-201ENST00000446037 609 ntBASIC4.35□□□□□ -1.71
USP47Q96K76 RPL31P20-201ENST00000449593 360 ntBASIC4.35□□□□□ -1.71
USP47Q96K76 PRDX3P4-201ENST00000470828 747 ntBASIC4.35□□□□□ -1.71
USP47Q96K76 SNORA64.4-201ENST00000516632 81 ntBASIC4.35□□□□□ -1.71
USP47Q96K76 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.35□□□□□ -1.71
USP47Q96K76 OR8X1P-201ENST00000534542 869 ntBASIC4.35□□□□□ -1.71
USP47Q96K76 AL121603.1-201ENST00000553815 142 ntBASIC4.35□□□□□ -1.71
USP47Q96K76 MIR4672-201ENST00000583126 81 ntBASIC4.35□□□□□ -1.71
USP47Q96K76 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.35□□□□□ -1.71
USP47Q96K76 AC093732.2-201ENST00000607950 274 ntBASIC4.35□□□□□ -1.71
USP47Q96K76 MIR622-201ENST00000638396 96 ntBASIC4.35□□□□□ -1.71
USP47Q96K76 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.35□□□□□ -1.71
USP47Q96K76 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.34□□□□□ -1.71
USP47Q96K76 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.34□□□□□ -1.71
USP47Q96K76 AL049555.1-201ENST00000562834 1933 ntBASIC4.34□□□□□ -1.71
USP47Q96K76 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms