Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AP000843.1-201ENST00000624880 701 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 OR5AK4P-201ENST00000635912 903 ntBASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A3Q8N4M1 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 AL121950.1-201ENST00000624993 2077 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 SALL4P2-201ENST00000423288 2910 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 AL122126.1-201ENST00000546905 1318 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 RPL32P23-201ENST00000397237 405 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 BTF3P7-201ENST00000407097 488 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 RPL12P9-201ENST00000412942 488 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 AL935212.3-201ENST00000450729 284 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 AC090013.1-201ENST00000485147 480 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 RPL36AP41-201ENST00000493820 306 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 SNX5P1-201ENST00000505757 1041 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 PRDX4P1-201ENST00000507189 574 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 KRT19P6-201ENST00000510983 209 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 MIR2116-201ENST00000517221 80 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 IGLVIV-65-201ENST00000517313 360 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 ADI1P3-201ENST00000549509 470 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 AC025884.1-201ENST00000556034 378 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 AC034105.4-201ENST00000568304 277 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 MIR548AB-201ENST00000584917 84 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 AL356055.1-201ENST00000602528 446 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 AL353621.2-201ENST00000605340 133 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 AP002360.3-201ENST00000607673 710 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 AC006566.1-201ENST00000608943 513 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 AL356596.1-201ENST00000624230 379 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 OR5H6-203ENST00000642105 978 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 ZFRP1-201ENST00000457579 2970 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
SLC44A3Q8N4M1 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AC063976.2-201ENST00000425667 3556 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 RPL21P132-201ENST00000331267 462 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 RNU6-433P-201ENST00000363216 104 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 Y_RNA.554-201ENST00000384672 102 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AC007066.1-201ENST00000392902 381 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 RPL17P50-201ENST00000396131 546 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 NCSTNP1-201ENST00000406229 144 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 TMBIM7P-201ENST00000418074 855 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 RPL21P32-201ENST00000419877 477 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 MTND4P28-201ENST00000426217 387 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 RPS12P10-201ENST00000427031 377 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AC092162.1-201ENST00000432828 434 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 UBE2FP3-201ENST00000436366 524 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AL512326.1-201ENST00000443050 721 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 CYCSP24-201ENST00000445119 316 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AL034418.1-201ENST00000448675 860 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 ARPC3P2-201ENST00000457786 533 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 TRBV8-2-201ENST00000475637 270 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 TMED11P-201ENST00000479478 690 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 RPS4XP15-201ENST00000489210 795 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AC091167.1-201ENST00000492017 396 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 RN7SL810P-201ENST00000493031 276 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AC109471.1-201ENST00000511631 612 ntBASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC44A3Q8N4M1 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms