Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.63□□□□□ -1.99
HMGN3Q15651 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HMGN3Q15651 XKRY2-202ENST00000623874 1581 ntBASIC2.63□□□□□ -1.99
HMGN3Q15651 XKRY-202ENST00000624960 1581 ntBASIC2.63□□□□□ -1.99
HMGN3Q15651 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HMGN3Q15651 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
HMGN3Q15651 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
HMGN3Q15651 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.63□□□□□ -1.99
HMGN3Q15651 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.63□□□□□ -1.99
HMGN3Q15651 HSPE1P27-201ENST00000430808 296 ntBASIC2.63□□□□□ -1.99
HMGN3Q15651 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC2.63□□□□□ -1.99
HMGN3Q15651 AL359073.1-201ENST00000448036 403 ntBASIC2.63□□□□□ -1.99
HMGN3Q15651 OR6K1P-201ENST00000456766 971 ntBASIC2.63□□□□□ -1.99
HMGN3Q15651 ARPC3P2-201ENST00000457786 533 ntBASIC2.63□□□□□ -1.99
HMGN3Q15651 AC008571.1-201ENST00000467232 300 ntBASIC2.63□□□□□ -1.99
HMGN3Q15651 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC2.63□□□□□ -1.99
HMGN3Q15651 AC073522.1-201ENST00000483312 377 ntBASIC2.63□□□□□ -1.99
HMGN3Q15651 AC098799.2-201ENST00000509466 868 ntBASIC2.63□□□□□ -1.99
HMGN3Q15651 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC2.63□□□□□ -1.99
HMGN3Q15651 AC023632.4-201ENST00000517783 191 ntBASIC2.63□□□□□ -1.99
HMGN3Q15651 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HMGN3Q15651 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.63□□□□□ -1.99
HMGN3Q15651 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.63□□□□□ -1.99
HMGN3Q15651 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.63□□□□□ -1.99
HMGN3Q15651 AC119501.1-201ENST00000603646 475 ntBASIC2.63□□□□□ -1.99
HMGN3Q15651 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HMGN3Q15651 AC231759.1-201ENST00000616455 597 ntBASIC2.63□□□□□ -1.99
HMGN3Q15651 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.63□□□□□ -1.99
HMGN3Q15651 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HMGN3Q15651 AL118496.1-201ENST00000440201 1812 ntBASIC2.63□□□□□ -1.99
HMGN3Q15651 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
HMGN3Q15651 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
HMGN3Q15651 MIR490-201ENST00000384865 128 ntBASIC2.62□□□□□ -1.99
HMGN3Q15651 AL357075.1-201ENST00000404107 726 ntBASIC2.62□□□□□ -1.99
HMGN3Q15651 RNU2-65P-201ENST00000410162 185 ntBASIC2.62□□□□□ -1.99
HMGN3Q15651 RNU2-6P-201ENST00000411404 190 ntBASIC2.62□□□□□ -1.99
HMGN3Q15651 AC063979.1-201ENST00000415539 377 ntBASIC2.62□□□□□ -1.99
HMGN3Q15651 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.62□□□□□ -1.99
HMGN3Q15651 SAR1AP4-201ENST00000429225 591 ntBASIC2.62□□□□□ -1.99
HMGN3Q15651 MTCO1P43-201ENST00000431831 488 ntBASIC2.62□□□□□ -1.99
HMGN3Q15651 AL662791.1-201ENST00000441992 928 ntBASIC2.62□□□□□ -1.99
HMGN3Q15651 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
HMGN3Q15651 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.62□□□□□ -1.99
HMGN3Q15651 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.62□□□□□ -1.99
HMGN3Q15651 RSL24D1P2-201ENST00000445584 366 ntBASIC2.62□□□□□ -1.99
HMGN3Q15651 AC069540.1-201ENST00000446320 988 ntBASIC2.62□□□□□ -1.99
HMGN3Q15651 VN1R48P-201ENST00000448149 1036 ntBASIC2.62□□□□□ -1.99
HMGN3Q15651 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
HMGN3Q15651 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.62□□□□□ -1.99
HMGN3Q15651 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC2.62□□□□□ -1.99
HMGN3Q15651 AC008155.2-201ENST00000464337 397 ntBASIC2.62□□□□□ -1.99
HMGN3Q15651 AP004217.1-201ENST00000480579 346 ntBASIC2.62□□□□□ -1.99
HMGN3Q15651 AC012170.1-201ENST00000495139 359 ntBASIC2.62□□□□□ -1.99
HMGN3Q15651 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.62□□□□□ -1.99
HMGN3Q15651 AC006499.5-201ENST00000505037 514 ntBASIC2.62□□□□□ -1.99
HMGN3Q15651 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
HMGN3Q15651 AC110794.1-201ENST00000505816 425 ntBASIC2.62□□□□□ -1.99
HMGN3Q15651 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.62□□□□□ -1.99
HMGN3Q15651 RNA5SP76-201ENST00000516277 87 ntBASIC2.62□□□□□ -1.99
HMGN3Q15651 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.62□□□□□ -1.99
HMGN3Q15651 VN1R84P-201ENST00000593697 235 ntBASIC2.62□□□□□ -1.99
HMGN3Q15651 AC015849.2-201ENST00000605738 409 ntBASIC2.62□□□□□ -1.99
HMGN3Q15651 MIR6733-201ENST00000635723 61 ntBASIC2.62□□□□□ -1.99
HMGN3Q15651 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.62□□□□□ -1.99
HMGN3Q15651 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HMGN3Q15651 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.62□□□□□ -1.99
HMGN3Q15651 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.62□□□□□ -1.99
HMGN3Q15651 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HMGN3Q15651 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
HMGN3Q15651 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HMGN3Q15651 RPL23AP57-201ENST00000332361 466 ntBASIC2.61□□□□□ -1.99
HMGN3Q15651 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.61□□□□□ -1.99
HMGN3Q15651 AC025750.1-201ENST00000399891 379 ntBASIC2.61□□□□□ -1.99
HMGN3Q15651 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HMGN3Q15651 HSPE1P26-201ENST00000405341 275 ntBASIC2.61□□□□□ -1.99
HMGN3Q15651 RNU6-603P-201ENST00000411403 107 ntBASIC2.61□□□□□ -1.99
HMGN3Q15651 RPS7P15-201ENST00000415804 584 ntBASIC2.61□□□□□ -1.99
HMGN3Q15651 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC2.61□□□□□ -1.99
HMGN3Q15651 MTCO1P52-201ENST00000433928 531 ntBASIC2.61□□□□□ -1.99
HMGN3Q15651 MUPP-201ENST00000438111 566 ntBASIC2.61□□□□□ -1.99
HMGN3Q15651 PDSS1P2-201ENST00000449397 678 ntBASIC2.61□□□□□ -1.99
HMGN3Q15651 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC2.61□□□□□ -1.99
HMGN3Q15651 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.61□□□□□ -1.99
HMGN3Q15651 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.61□□□□□ -1.99
HMGN3Q15651 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.61□□□□□ -1.99
HMGN3Q15651 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.61□□□□□ -1.99
HMGN3Q15651 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.61□□□□□ -1.99
HMGN3Q15651 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.61□□□□□ -1.99
HMGN3Q15651 AC006504.3-201ENST00000586818 523 ntBASIC2.61□□□□□ -1.99
HMGN3Q15651 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.61□□□□□ -1.99
HMGN3Q15651 CKS1BP3-201ENST00000600888 237 ntBASIC2.61□□□□□ -1.99
HMGN3Q15651 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.61□□□□□ -1.99
HMGN3Q15651 AC005229.3-201ENST00000603438 323 ntBASIC2.61□□□□□ -1.99
HMGN3Q15651 AL049844.2-201ENST00000604280 628 ntBASIC2.61□□□□□ -1.99
HMGN3Q15651 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.61□□□□□ -1.99
HMGN3Q15651 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.61□□□□□ -1.99
HMGN3Q15651 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.61□□□□□ -1.99
HMGN3Q15651 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HMGN3Q15651 CDY3P-201ENST00000454543 1618 ntBASIC2.6□□□□□ -1.99
HMGN3Q15651 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms