Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AC109309.2-201ENST00000612597 332 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 AC006338.1-201ENST00000618453 749 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 AC009704.2-201ENST00000618739 483 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 AC004009.2-201ENST00000623016 728 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 AL049767.1-202ENST00000637826 242 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.07□□□□□ -1.6
IRF9Q00978 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.07□□□□□ -1.6
IRF9Q00978 AC097714.1-201ENST00000511272 1647 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
IRF9Q00978 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.07□□□□□ -1.6
IRF9Q00978 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
IRF9Q00978 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
IRF9Q00978 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
IRF9Q00978 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
IRF9Q00978 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
IRF9Q00978 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.06□□□□□ -1.6
IRF9Q00978 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.06□□□□□ -1.6
IRF9Q00978 AC092447.10-201ENST00000620607 1652 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
IRF9Q00978 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
IRF9Q00978 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
IRF9Q00978 AL161781.1-201ENST00000354277 403 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 RNY4P14-201ENST00000363656 96 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
IRF9Q00978 SNORA2.3-201ENST00000383920 135 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
IRF9Q00978 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.06□□□□□ -1.6
IRF9Q00978 AC007738.1-201ENST00000413892 348 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 MTATP6P27-201ENST00000416987 621 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 AC013429.2-201ENST00000418798 781 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.06□□□□□ -1.6
IRF9Q00978 AC073464.1-201ENST00000429823 534 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 FCF1P1-201ENST00000432690 571 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 RPL35AP21-201ENST00000437667 333 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 RPS11P7-201ENST00000442125 465 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 RPS4XP4-201ENST00000443195 763 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.06□□□□□ -1.6
IRF9Q00978 C1DP4-201ENST00000455429 424 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 RPS20P32-201ENST00000456044 356 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 AL359385.1-201ENST00000456509 365 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.06□□□□□ -1.6
IRF9Q00978 RPL38P1-201ENST00000460914 211 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 AL133445.1-201ENST00000467051 452 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 RN7SL184P-201ENST00000488308 297 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 AC093267.1-201ENST00000489176 961 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.06□□□□□ -1.6
IRF9Q00978 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.06□□□□□ -1.6
IRF9Q00978 ARL4AP2-201ENST00000507378 601 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.06□□□□□ -1.6
IRF9Q00978 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
IRF9Q00978 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.06□□□□□ -1.6
IRF9Q00978 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.06□□□□□ -1.6
IRF9Q00978 AC124068.1-201ENST00000563131 678 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.06□□□□□ -1.6
IRF9Q00978 AC012417.1-201ENST00000582307 1039 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.06□□□□□ -1.6
IRF9Q00978 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.06□□□□□ -1.6
IRF9Q00978 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.06□□□□□ -1.6
IRF9Q00978 AC069307.1-201ENST00000602820 447 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 AC011468.4-201ENST00000603942 409 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 AC011816.2-201ENST00000607089 556 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.06□□□□□ -1.6
IRF9Q00978 Z95327.3-201ENST00000610385 572 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 AC069234.5-201ENST00000611056 416 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.06□□□□□ -1.6
IRF9Q00978 RPSAP73-201ENST00000614820 330 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.06□□□□□ -1.6
IRF9Q00978 MIR6886-201ENST00000619864 61 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 AL732618.1-201ENST00000623251 301 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.06□□□□□ -1.6
IRF9Q00978 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
IRF9Q00978 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
IRF9Q00978 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
IRF9Q00978 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.06□□□□□ -1.6
IRF9Q00978 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
IRF9Q00978 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.06□□□□□ -1.6
IRF9Q00978 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
IRF9Q00978 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.06□□□□□ -1.6
IRF9Q00978 AC000374.1-201ENST00000434698 1745 ntBASIC5.06□□□□□ -1.6
IRF9Q00978 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
IRF9Q00978 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
IRF9Q00978 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
IRF9Q00978 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
IRF9Q00978 AL122126.1-201ENST00000546905 1318 ntBASIC5.05□□□□□ -1.6
IRF9Q00978 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
IRF9Q00978 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
IRF9Q00978 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.05□□□□□ -1.6
IRF9Q00978 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
IRF9Q00978 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.05□□□□□ -1.6
IRF9Q00978 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
IRF9Q00978 RNU6-28P-201ENST00000362378 107 ntBASIC5.05□□□□□ -1.6
IRF9Q00978 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
IRF9Q00978 Y_RNA.402-201ENST00000383972 102 ntBASIC5.05□□□□□ -1.6
IRF9Q00978 RNU6-1103P-201ENST00000384150 107 ntBASIC5.05□□□□□ -1.6
IRF9Q00978 RNU6-780P-201ENST00000391030 104 ntBASIC5.05□□□□□ -1.6
IRF9Q00978 RPL31P1-201ENST00000398116 372 ntBASIC5.05□□□□□ -1.6
IRF9Q00978 RPL35AP24-201ENST00000413846 330 ntBASIC5.05□□□□□ -1.6
IRF9Q00978 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms