Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 SNORA70.18-201ENST00000516696 98 ntBASIC3.05□□□□□ -1.92
LSM6P62312 RN7SKP277-201ENST00000516895 283 ntBASIC3.05□□□□□ -1.92
LSM6P62312 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.05□□□□□ -1.92
LSM6P62312 IGKV2-36-201ENST00000519999 223 ntBASIC3.05□□□□□ -1.92
LSM6P62312 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.05□□□□□ -1.92
LSM6P62312 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.05□□□□□ -1.92
LSM6P62312 AC103843.2-201ENST00000530523 682 ntBASIC3.05□□□□□ -1.92
LSM6P62312 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.05□□□□□ -1.92
LSM6P62312 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.05□□□□□ -1.92
LSM6P62312 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.05□□□□□ -1.92
LSM6P62312 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.05□□□□□ -1.92
LSM6P62312 AC106785.1-201ENST00000565935 262 ntBASIC3.05□□□□□ -1.92
LSM6P62312 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LSM6P62312 SNRPGP15-201ENST00000600149 222 ntBASIC3.05□□□□□ -1.92
LSM6P62312 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.05□□□□□ -1.92
LSM6P62312 AC006557.5-201ENST00000603126 811 ntBASIC3.05□□□□□ -1.92
LSM6P62312 AL121772.2-201ENST00000614331 297 ntBASIC3.05□□□□□ -1.92
LSM6P62312 U4.6-201ENST00000621618 127 ntBASIC3.05□□□□□ -1.92
LSM6P62312 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.05□□□□□ -1.92
LSM6P62312 AC017071.1-201ENST00000564407 2204 ntBASIC3.05□□□□□ -1.92
LSM6P62312 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LSM6P62312 AL513302.2-201ENST00000562313 1842 ntBASIC3.05□□□□□ -1.92
LSM6P62312 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
LSM6P62312 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.05□□□□□ -1.92
LSM6P62312 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LSM6P62312 MTND5P27-201ENST00000428871 1720 ntBASIC3.05□□□□□ -1.92
LSM6P62312 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
LSM6P62312 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.04□□□□□ -1.92
LSM6P62312 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
LSM6P62312 AL365440.1-201ENST00000436135 2167 ntBASIC3.04□□□□□ -1.92
LSM6P62312 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LSM6P62312 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LSM6P62312 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LSM6P62312 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
LSM6P62312 RPL7P26-201ENST00000333817 754 ntBASIC3.04□□□□□ -1.92
LSM6P62312 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LSM6P62312 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LSM6P62312 AL359837.1-201ENST00000381357 287 ntBASIC3.04□□□□□ -1.92
LSM6P62312 SNORA5A-201ENST00000384111 134 ntBASIC3.04□□□□□ -1.92
LSM6P62312 RANP4-201ENST00000413361 655 ntBASIC3.04□□□□□ -1.92
LSM6P62312 RPS7P13-201ENST00000413955 498 ntBASIC3.04□□□□□ -1.92
LSM6P62312 NUP35P2-201ENST00000416748 943 ntBASIC3.04□□□□□ -1.92
LSM6P62312 DBIP2-201ENST00000419076 262 ntBASIC3.04□□□□□ -1.92
LSM6P62312 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.04□□□□□ -1.92
LSM6P62312 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.04□□□□□ -1.92
LSM6P62312 RPS4XP2-201ENST00000458402 793 ntBASIC3.04□□□□□ -1.92
LSM6P62312 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.04□□□□□ -1.92
LSM6P62312 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.04□□□□□ -1.92
LSM6P62312 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.04□□□□□ -1.92
LSM6P62312 AC107934.2-201ENST00000518653 310 ntBASIC3.04□□□□□ -1.92
LSM6P62312 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.04□□□□□ -1.92
LSM6P62312 AC025857.1-201ENST00000525252 377 ntBASIC3.04□□□□□ -1.92
LSM6P62312 AP001636.2-201ENST00000525517 696 ntBASIC3.04□□□□□ -1.92
LSM6P62312 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.04□□□□□ -1.92
LSM6P62312 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.04□□□□□ -1.92
LSM6P62312 AC006518.1-201ENST00000541449 943 ntBASIC3.04□□□□□ -1.92
LSM6P62312 AC011602.1-201ENST00000546484 331 ntBASIC3.04□□□□□ -1.92
LSM6P62312 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.04□□□□□ -1.92
LSM6P62312 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.04□□□□□ -1.92
LSM6P62312 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.04□□□□□ -1.92
LSM6P62312 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.04□□□□□ -1.92
LSM6P62312 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LSM6P62312 HMGB1P51-201ENST00000605166 638 ntBASIC3.04□□□□□ -1.92
LSM6P62312 AC009093.8-201ENST00000641769 292 ntBASIC3.04□□□□□ -1.92
LSM6P62312 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
LSM6P62312 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
LSM6P62312 ZNF285B-201ENST00000561698 1767 ntBASIC3.04□□□□□ -1.92
LSM6P62312 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.04□□□□□ -1.92
LSM6P62312 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LSM6P62312 AL021368.2-201ENST00000606125 5352 ntBASIC3.03□□□□□ -1.92
LSM6P62312 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.03□□□□□ -1.92
LSM6P62312 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
LSM6P62312 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
LSM6P62312 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.03□□□□□ -1.92
LSM6P62312 RPS15AP40-201ENST00000419621 391 ntBASIC3.03□□□□□ -1.92
LSM6P62312 AL513174.1-201ENST00000423182 629 ntBASIC3.03□□□□□ -1.92
LSM6P62312 AC012498.1-201ENST00000424037 437 ntBASIC3.03□□□□□ -1.92
LSM6P62312 NIPA2P1-201ENST00000426223 976 ntBASIC3.03□□□□□ -1.92
LSM6P62312 TRIAP1P1-201ENST00000427062 225 ntBASIC3.03□□□□□ -1.92
LSM6P62312 RPL23AP82-202ENST00000427528 469 ntBASIC3.03□□□□□ -1.92
LSM6P62312 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LSM6P62312 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.03□□□□□ -1.92
LSM6P62312 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LSM6P62312 AC008264.1-201ENST00000447612 367 ntBASIC3.03□□□□□ -1.92
LSM6P62312 RPL7P52-201ENST00000449200 742 ntBASIC3.03□□□□□ -1.92
LSM6P62312 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.03□□□□□ -1.92
LSM6P62312 AL513343.1-201ENST00000451818 792 ntBASIC3.03□□□□□ -1.92
LSM6P62312 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.03□□□□□ -1.92
LSM6P62312 RBMY2UP-201ENST00000453474 324 ntBASIC3.03□□□□□ -1.92
LSM6P62312 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.03□□□□□ -1.92
LSM6P62312 CENPBD1P1-201ENST00000464061 469 ntBASIC3.03□□□□□ -1.92
LSM6P62312 AC087312.1-201ENST00000471411 480 ntBASIC3.03□□□□□ -1.92
LSM6P62312 RN7SL442P-201ENST00000473804 320 ntBASIC3.03□□□□□ -1.92
LSM6P62312 AC106707.2-201ENST00000484182 374 ntBASIC3.03□□□□□ -1.92
LSM6P62312 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.03□□□□□ -1.92
LSM6P62312 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
LSM6P62312 AC110768.1-201ENST00000509222 400 ntBASIC3.03□□□□□ -1.92
LSM6P62312 TXNP6-201ENST00000510190 310 ntBASIC3.03□□□□□ -1.92
LSM6P62312 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.03□□□□□ -1.92
LSM6P62312 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms