Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN6P56747 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CLDN6P56747 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN6P56747 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
CLDN6P56747 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN6P56747 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.41□□□□□ -1.86
CLDN6P56747 OTUD4P1-201ENST00000237841 3067 ntBASIC3.41□□□□□ -1.86
CLDN6P56747 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN6P56747 RNA5SP167-201ENST00000365461 116 ntBASIC3.41□□□□□ -1.86
CLDN6P56747 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN6P56747 Y_RNA.500-201ENST00000384466 111 ntBASIC3.41□□□□□ -1.86
CLDN6P56747 SNORA70E-201ENST00000384492 135 ntBASIC3.41□□□□□ -1.86
CLDN6P56747 MIR142-201ENST00000384835 87 ntBASIC3.41□□□□□ -1.86
CLDN6P56747 HMGN2P8-201ENST00000391458 268 ntBASIC3.41□□□□□ -1.86
CLDN6P56747 RNU2-6P-201ENST00000411404 190 ntBASIC3.41□□□□□ -1.86
CLDN6P56747 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN6P56747 IFNNP1-201ENST00000429219 553 ntBASIC3.41□□□□□ -1.86
CLDN6P56747 RPL7P29-201ENST00000437151 728 ntBASIC3.41□□□□□ -1.86
CLDN6P56747 AC092809.1-201ENST00000441469 474 ntBASIC3.41□□□□□ -1.86
CLDN6P56747 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN6P56747 RPS20P32-201ENST00000456044 356 ntBASIC3.41□□□□□ -1.86
CLDN6P56747 HMGB3P30-201ENST00000457863 606 ntBASIC3.41□□□□□ -1.86
CLDN6P56747 AC004069.2-201ENST00000505438 1114 ntBASIC3.41□□□□□ -1.86
CLDN6P56747 AC005351.1-201ENST00000511152 786 ntBASIC3.41□□□□□ -1.86
CLDN6P56747 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN6P56747 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN6P56747 AC025260.1-201ENST00000548858 430 ntBASIC3.41□□□□□ -1.86
CLDN6P56747 AC090751.1-201ENST00000566966 267 ntBASIC3.41□□□□□ -1.86
CLDN6P56747 AC141257.3-201ENST00000572906 215 ntBASIC3.41□□□□□ -1.86
CLDN6P56747 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN6P56747 AP001542.1-201ENST00000591314 200 ntBASIC3.41□□□□□ -1.86
CLDN6P56747 AL451007.1-201ENST00000595491 289 ntBASIC3.41□□□□□ -1.86
CLDN6P56747 AL390816.3-201ENST00000604527 1066 ntBASIC3.41□□□□□ -1.86
CLDN6P56747 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN6P56747 AC006946.3-201ENST00000609791 756 ntBASIC3.41□□□□□ -1.86
CLDN6P56747 AC121761.2-201ENST00000617300 689 ntBASIC3.41□□□□□ -1.86
CLDN6P56747 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CLDN6P56747 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN6P56747 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN6P56747 AC006504.1-201ENST00000562493 3666 ntBASIC3.41□□□□□ -1.86
CLDN6P56747 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN6P56747 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN6P56747 AC095050.2-201ENST00000510748 1458 ntBASIC3.41□□□□□ -1.86
CLDN6P56747 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN6P56747 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN6P56747 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLDN6P56747 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.4□□□□□ -1.86
CLDN6P56747 HSPA8P19-201ENST00000505359 1517 ntBASIC3.4□□□□□ -1.86
CLDN6P56747 AC008725.1-201ENST00000605123 2263 ntBASIC3.4□□□□□ -1.86
CLDN6P56747 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLDN6P56747 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.4□□□□□ -1.86
CLDN6P56747 FRG1CP-201ENST00000358464 769 ntBASIC3.4□□□□□ -1.87
CLDN6P56747 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CLDN6P56747 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CLDN6P56747 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CLDN6P56747 RNU6-356P-201ENST00000384140 107 ntBASIC3.4□□□□□ -1.87
CLDN6P56747 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN6P56747 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.4□□□□□ -1.87
CLDN6P56747 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN6P56747 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN6P56747 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN6P56747 AC010655.1-201ENST00000449336 292 ntBASIC3.4□□□□□ -1.87
CLDN6P56747 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN6P56747 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN6P56747 AC010307.1-201ENST00000467206 836 ntBASIC3.4□□□□□ -1.87
CLDN6P56747 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN6P56747 PTGES3P3-201ENST00000511479 482 ntBASIC3.4□□□□□ -1.87
CLDN6P56747 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN6P56747 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN6P56747 IGKV2-26-201ENST00000518305 343 ntBASIC3.4□□□□□ -1.87
CLDN6P56747 AC024341.1-201ENST00000526444 1552 ntBASIC3.4□□□□□ -1.87
CLDN6P56747 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN6P56747 UBE2NP1-201ENST00000545592 458 ntBASIC3.4□□□□□ -1.87
CLDN6P56747 RNA5SP108-201ENST00000605921 117 ntBASIC3.4□□□□□ -1.87
CLDN6P56747 AC135507.2-201ENST00000612443 309 ntBASIC3.4□□□□□ -1.87
CLDN6P56747 CR589904.2-201ENST00000612533 440 ntBASIC3.4□□□□□ -1.87
CLDN6P56747 MIR6864-201ENST00000617935 70 ntBASIC3.4□□□□□ -1.87
CLDN6P56747 AC069209.1-201ENST00000619282 651 ntBASIC3.4□□□□□ -1.87
CLDN6P56747 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLDN6P56747 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN6P56747 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.4□□□□□ -1.87
CLDN6P56747 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN6P56747 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
CLDN6P56747 AL645937.1-201ENST00000641739 1652 ntBASIC3.39□□□□□ -1.87
CLDN6P56747 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CLDN6P56747 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.39□□□□□ -1.87
CLDN6P56747 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN6P56747 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN6P56747 ZNF807-201ENST00000328088 1707 ntBASIC3.39□□□□□ -1.87
CLDN6P56747 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN6P56747 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN6P56747 DDX6P1-205ENST00000441966 1436 ntBASIC3.39□□□□□ -1.87
CLDN6P56747 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.39□□□□□ -1.87
CLDN6P56747 HLFP1-201ENST00000402375 499 ntBASIC3.39□□□□□ -1.87
CLDN6P56747 AL589655.1-201ENST00000405398 482 ntBASIC3.39□□□□□ -1.87
CLDN6P56747 HMGB1P13-201ENST00000406019 642 ntBASIC3.39□□□□□ -1.87
CLDN6P56747 MIR1303-201ENST00000408625 86 ntBASIC3.39□□□□□ -1.87
CLDN6P56747 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN6P56747 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.39□□□□□ -1.87
CLDN6P56747 HMGB3P20-201ENST00000417997 600 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms