Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.07□□□□□ -1.76
VCPP55072 AC069540.1-201ENST00000446320 988 ntBASIC4.07□□□□□ -1.76
VCPP55072 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
VCPP55072 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.07□□□□□ -1.76
VCPP55072 AC096992.1-201ENST00000459808 709 ntBASIC4.07□□□□□ -1.76
VCPP55072 RPS4XP10-201ENST00000465034 731 ntBASIC4.07□□□□□ -1.76
VCPP55072 AC017015.1-201ENST00000477387 286 ntBASIC4.07□□□□□ -1.76
VCPP55072 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.07□□□□□ -1.76
VCPP55072 AC104687.1-201ENST00000485829 412 ntBASIC4.07□□□□□ -1.76
VCPP55072 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.07□□□□□ -1.76
VCPP55072 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.07□□□□□ -1.76
VCPP55072 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.07□□□□□ -1.76
VCPP55072 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.07□□□□□ -1.76
VCPP55072 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.07□□□□□ -1.76
VCPP55072 NDUFA5P2-201ENST00000519723 344 ntBASIC4.07□□□□□ -1.76
VCPP55072 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.07□□□□□ -1.76
VCPP55072 AC009101.1-201ENST00000568135 242 ntBASIC4.07□□□□□ -1.76
VCPP55072 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.07□□□□□ -1.76
VCPP55072 AC005776.1-201ENST00000603164 290 ntBASIC4.07□□□□□ -1.76
VCPP55072 AL158211.2-201ENST00000607282 395 ntBASIC4.07□□□□□ -1.76
VCPP55072 AP000720.1-201ENST00000625091 483 ntBASIC4.07□□□□□ -1.76
VCPP55072 ZNF33CP-201ENST00000432492 2030 ntBASIC4.07□□□□□ -1.76
VCPP55072 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.07□□□□□ -1.76
VCPP55072 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VCPP55072 MTND5P11-201ENST00000511037 1812 ntBASIC4.07□□□□□ -1.76
VCPP55072 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VCPP55072 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
VCPP55072 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.06□□□□□ -1.76
VCPP55072 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VCPP55072 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.06□□□□□ -1.76
VCPP55072 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
VCPP55072 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.06□□□□□ -1.76
VCPP55072 LINC01347-201ENST00000417964 355 ntBASIC4.06□□□□□ -1.76
VCPP55072 IFNNP1-201ENST00000429219 553 ntBASIC4.06□□□□□ -1.76
VCPP55072 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VCPP55072 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.06□□□□□ -1.76
VCPP55072 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.06□□□□□ -1.76
VCPP55072 RANP8-201ENST00000444720 713 ntBASIC4.06□□□□□ -1.76
VCPP55072 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.06□□□□□ -1.76
VCPP55072 HMGB3P30-201ENST00000457863 606 ntBASIC4.06□□□□□ -1.76
VCPP55072 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
VCPP55072 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.06□□□□□ -1.76
VCPP55072 RN7SKP234-201ENST00000517173 224 ntBASIC4.06□□□□□ -1.76
VCPP55072 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.06□□□□□ -1.76
VCPP55072 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.06□□□□□ -1.76
VCPP55072 AC092851.1-201ENST00000535964 478 ntBASIC4.06□□□□□ -1.76
VCPP55072 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.06□□□□□ -1.76
VCPP55072 AGGF1P8-201ENST00000562979 1000 ntBASIC4.06□□□□□ -1.76
VCPP55072 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.06□□□□□ -1.76
VCPP55072 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
VCPP55072 AC018618.2-201ENST00000604770 446 ntBASIC4.06□□□□□ -1.76
VCPP55072 AL392112.1-201ENST00000605115 829 ntBASIC4.06□□□□□ -1.76
VCPP55072 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.06□□□□□ -1.76
VCPP55072 AC092574.1-201ENST00000609771 420 ntBASIC4.06□□□□□ -1.76
VCPP55072 AC084824.5-201ENST00000612009 413 ntBASIC4.06□□□□□ -1.76
VCPP55072 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.06□□□□□ -1.76
VCPP55072 AL163051.2-201ENST00000618976 735 ntBASIC4.06□□□□□ -1.76
VCPP55072 AC006065.5-201ENST00000623427 349 ntBASIC4.06□□□□□ -1.76
VCPP55072 NCAPGP1-201ENST00000505112 1814 ntBASIC4.06□□□□□ -1.76
VCPP55072 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VCPP55072 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.05□□□□□ -1.76
VCPP55072 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
VCPP55072 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VCPP55072 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.05□□□□□ -1.76
VCPP55072 AC004944.1-201ENST00000517807 3059 ntBASIC4.05□□□□□ -1.76
VCPP55072 GNG5P1-201ENST00000255500 204 ntBASIC4.05□□□□□ -1.76
VCPP55072 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VCPP55072 MIR490-201ENST00000384865 128 ntBASIC4.05□□□□□ -1.76
VCPP55072 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
VCPP55072 HMGN2P8-201ENST00000391458 268 ntBASIC4.05□□□□□ -1.76
VCPP55072 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
VCPP55072 SNORA3.3-201ENST00000408712 125 ntBASIC4.05□□□□□ -1.76
VCPP55072 VN1R51P-201ENST00000411675 945 ntBASIC4.05□□□□□ -1.76
VCPP55072 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.05□□□□□ -1.76
VCPP55072 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.05□□□□□ -1.76
VCPP55072 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.05□□□□□ -1.76
VCPP55072 PTP4A1P5-201ENST00000420305 455 ntBASIC4.05□□□□□ -1.76
VCPP55072 RPL7P44-201ENST00000424827 742 ntBASIC4.05□□□□□ -1.76
VCPP55072 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.05□□□□□ -1.76
VCPP55072 AP000949.1-201ENST00000438328 629 ntBASIC4.05□□□□□ -1.76
VCPP55072 MRPL35P4-201ENST00000453682 566 ntBASIC4.05□□□□□ -1.76
VCPP55072 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.05□□□□□ -1.76
VCPP55072 RPL7P23-201ENST00000493874 747 ntBASIC4.05□□□□□ -1.76
VCPP55072 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.05□□□□□ -1.76
VCPP55072 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.05□□□□□ -1.76
VCPP55072 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.05□□□□□ -1.76
VCPP55072 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.05□□□□□ -1.76
VCPP55072 SCARNA14-201ENST00000516903 136 ntBASIC4.05□□□□□ -1.76
VCPP55072 AC008802.1-201ENST00000519121 791 ntBASIC4.05□□□□□ -1.76
VCPP55072 AC087369.1-201ENST00000520775 996 ntBASIC4.05□□□□□ -1.76
VCPP55072 MTND1P36-201ENST00000522384 936 ntBASIC4.05□□□□□ -1.76
VCPP55072 OR5B10P-201ENST00000532869 642 ntBASIC4.05□□□□□ -1.76
VCPP55072 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.05□□□□□ -1.76
VCPP55072 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.05□□□□□ -1.76
VCPP55072 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.05□□□□□ -1.76
VCPP55072 EIF1P6-201ENST00000600054 334 ntBASIC4.05□□□□□ -1.76
VCPP55072 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.05□□□□□ -1.76
VCPP55072 AL390816.3-201ENST00000604527 1066 ntBASIC4.05□□□□□ -1.76
VCPP55072 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.05□□□□□ -1.76
VCPP55072 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms