Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
COPB1P53618 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
COPB1P53618 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.73□□□□□ -1.65
COPB1P53618 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COPB1P53618 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
COPB1P53618 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
COPB1P53618 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COPB1P53618 AC093535.2-201ENST00000624769 2326 ntBASIC4.73□□□□□ -1.65
COPB1P53618 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
COPB1P53618 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
COPB1P53618 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
COPB1P53618 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COPB1P53618 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.72□□□□□ -1.65
COPB1P53618 AC016588.2-201ENST00000632484 3021 ntBASIC4.72□□□□□ -1.65
COPB1P53618 RNU1-32P-201ENST00000363937 159 ntBASIC4.72□□□□□ -1.65
COPB1P53618 SNORD74.4-201ENST00000364129 80 ntBASIC4.72□□□□□ -1.65
COPB1P53618 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COPB1P53618 OR52E6-202ENST00000379946 954 ntBASIC4.72□□□□□ -1.65
COPB1P53618 MT-TH-201ENST00000387441 69 ntBASIC4.72□□□□□ -1.65
COPB1P53618 RNU6-192P-201ENST00000391253 100 ntBASIC4.72□□□□□ -1.65
COPB1P53618 SNORA26.8-201ENST00000391306 124 ntBASIC4.72□□□□□ -1.65
COPB1P53618 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
COPB1P53618 RNU2-42P-201ENST00000410697 113 ntBASIC4.72□□□□□ -1.65
COPB1P53618 PIGPP2-201ENST00000411569 458 ntBASIC4.72□□□□□ -1.65
COPB1P53618 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.72□□□□□ -1.65
COPB1P53618 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.72□□□□□ -1.65
COPB1P53618 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.72□□□□□ -1.65
COPB1P53618 VDAC1P6-201ENST00000430062 855 ntBASIC4.72□□□□□ -1.65
COPB1P53618 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
COPB1P53618 ELOCP30-201ENST00000447108 299 ntBASIC4.72□□□□□ -1.65
COPB1P53618 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.72□□□□□ -1.65
COPB1P53618 AC068587.1-201ENST00000483613 781 ntBASIC4.72□□□□□ -1.65
COPB1P53618 RPL23AP72-201ENST00000492447 435 ntBASIC4.72□□□□□ -1.65
COPB1P53618 AL024509.2-201ENST00000493462 493 ntBASIC4.72□□□□□ -1.65
COPB1P53618 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.72□□□□□ -1.65
COPB1P53618 DSTNP2-201ENST00000504533 515 ntBASIC4.72□□□□□ -1.65
COPB1P53618 AC025554.1-201ENST00000505641 188 ntBASIC4.72□□□□□ -1.65
COPB1P53618 AC010424.1-201ENST00000506336 297 ntBASIC4.72□□□□□ -1.65
COPB1P53618 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.72□□□□□ -1.65
COPB1P53618 AC008885.2-201ENST00000509506 930 ntBASIC4.72□□□□□ -1.65
COPB1P53618 LTV1P1-201ENST00000510683 1237 ntBASIC4.72□□□□□ -1.65
COPB1P53618 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.72□□□□□ -1.65
COPB1P53618 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.72□□□□□ -1.65
COPB1P53618 COX6B1P6-201ENST00000522347 255 ntBASIC4.72□□□□□ -1.65
COPB1P53618 MTCYBP20-201ENST00000524239 1129 ntBASIC4.72□□□□□ -1.65
COPB1P53618 AC007954.1-201ENST00000554198 494 ntBASIC4.72□□□□□ -1.65
COPB1P53618 AL109766.1-201ENST00000555080 552 ntBASIC4.72□□□□□ -1.65
COPB1P53618 AC007599.1-201ENST00000568688 1174 ntBASIC4.72□□□□□ -1.65
COPB1P53618 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.72□□□□□ -1.65
COPB1P53618 RSL24D1P11-201ENST00000591045 491 ntBASIC4.72□□□□□ -1.65
COPB1P53618 AC068790.6-201ENST00000602558 258 ntBASIC4.72□□□□□ -1.65
COPB1P53618 AC004987.4-201ENST00000603383 338 ntBASIC4.72□□□□□ -1.65
COPB1P53618 AC008782.1-201ENST00000603386 430 ntBASIC4.72□□□□□ -1.65
COPB1P53618 AC080078.2-201ENST00000603766 501 ntBASIC4.72□□□□□ -1.65
COPB1P53618 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.72□□□□□ -1.65
COPB1P53618 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.72□□□□□ -1.65
COPB1P53618 AC064801.1-201ENST00000612025 407 ntBASIC4.72□□□□□ -1.65
COPB1P53618 AL021997.2-201ENST00000615674 271 ntBASIC4.72□□□□□ -1.65
COPB1P53618 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
COPB1P53618 AC084035.1-201ENST00000634543 607 ntBASIC4.72□□□□□ -1.65
COPB1P53618 HSPA8P17-201ENST00000427029 1382 ntBASIC4.72□□□□□ -1.65
COPB1P53618 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
COPB1P53618 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
COPB1P53618 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COPB1P53618 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
COPB1P53618 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.72□□□□□ -1.65
COPB1P53618 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.71□□□□□ -1.65
COPB1P53618 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
COPB1P53618 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.71□□□□□ -1.65
COPB1P53618 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.71□□□□□ -1.65
COPB1P53618 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.71□□□□□ -1.65
COPB1P53618 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
COPB1P53618 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
COPB1P53618 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
COPB1P53618 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COPB1P53618 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COPB1P53618 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.71□□□□□ -1.66
COPB1P53618 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COPB1P53618 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COPB1P53618 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
COPB1P53618 SNORD116-23-201ENST00000384645 92 ntBASIC4.71□□□□□ -1.66
COPB1P53618 AL121834.1-202ENST00000404494 277 ntBASIC4.71□□□□□ -1.66
COPB1P53618 AL356967.1-201ENST00000406305 431 ntBASIC4.71□□□□□ -1.66
COPB1P53618 AC068533.2-201ENST00000411872 306 ntBASIC4.71□□□□□ -1.66
COPB1P53618 TPT1P2-201ENST00000413105 503 ntBASIC4.71□□□□□ -1.66
COPB1P53618 AC073136.2-201ENST00000417282 849 ntBASIC4.71□□□□□ -1.66
COPB1P53618 AC006366.1-201ENST00000422002 759 ntBASIC4.71□□□□□ -1.66
COPB1P53618 AL049610.1-201ENST00000423374 372 ntBASIC4.71□□□□□ -1.66
COPB1P53618 MTCO3P30-201ENST00000426425 670 ntBASIC4.71□□□□□ -1.66
COPB1P53618 IFNNP1-201ENST00000429219 553 ntBASIC4.71□□□□□ -1.66
COPB1P53618 USP9YP14-201ENST00000430663 563 ntBASIC4.71□□□□□ -1.66
COPB1P53618 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.71□□□□□ -1.66
COPB1P53618 AC091390.1-201ENST00000433904 331 ntBASIC4.71□□□□□ -1.66
COPB1P53618 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.71□□□□□ -1.66
COPB1P53618 ELOCP18-201ENST00000434209 337 ntBASIC4.71□□□□□ -1.66
COPB1P53618 PPIAP17-201ENST00000438507 471 ntBASIC4.71□□□□□ -1.66
COPB1P53618 RPL7P59-201ENST00000447700 943 ntBASIC4.71□□□□□ -1.66
COPB1P53618 AL034418.1-201ENST00000448675 860 ntBASIC4.71□□□□□ -1.66
COPB1P53618 AL162591.2-201ENST00000449634 317 ntBASIC4.71□□□□□ -1.66
COPB1P53618 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms