Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.51□□□□□ -1.53
MRE11P49959 AC092079.1-201ENST00000558620 1985 ntBASIC5.51□□□□□ -1.53
MRE11P49959 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
MRE11P49959 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
MRE11P49959 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.5□□□□□ -1.53
MRE11P49959 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
MRE11P49959 CCT8P1-201ENST00000413611 1657 ntBASIC5.5□□□□□ -1.53
MRE11P49959 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
MRE11P49959 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
MRE11P49959 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
MRE11P49959 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.5□□□□□ -1.53
MRE11P49959 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
MRE11P49959 SNORA4.1-201ENST00000364263 144 ntBASIC5.5□□□□□ -1.53
MRE11P49959 RNU5E-4P-201ENST00000364931 120 ntBASIC5.5□□□□□ -1.53
MRE11P49959 RNU6-98P-201ENST00000384173 107 ntBASIC5.5□□□□□ -1.53
MRE11P49959 RNU6-532P-201ENST00000384318 107 ntBASIC5.5□□□□□ -1.53
MRE11P49959 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.5□□□□□ -1.53
MRE11P49959 MIR1182-201ENST00000408363 97 ntBASIC5.5□□□□□ -1.53
MRE11P49959 RN7SKP33-201ENST00000410942 340 ntBASIC5.5□□□□□ -1.53
MRE11P49959 AC004552.1-201ENST00000419089 348 ntBASIC5.5□□□□□ -1.53
MRE11P49959 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.5□□□□□ -1.53
MRE11P49959 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5.5□□□□□ -1.53
MRE11P49959 AC104651.1-201ENST00000427559 735 ntBASIC5.5□□□□□ -1.53
MRE11P49959 AC010975.2-201ENST00000427781 588 ntBASIC5.5□□□□□ -1.53
MRE11P49959 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.5□□□□□ -1.53
MRE11P49959 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.5□□□□□ -1.53
MRE11P49959 AL139415.2-201ENST00000431968 163 ntBASIC5.5□□□□□ -1.53
MRE11P49959 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.5□□□□□ -1.53
MRE11P49959 OR6C5P-201ENST00000452388 923 ntBASIC5.5□□□□□ -1.53
MRE11P49959 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.5□□□□□ -1.53
MRE11P49959 PNPLA4P1-201ENST00000458328 305 ntBASIC5.5□□□□□ -1.53
MRE11P49959 RPS26P3-201ENST00000470205 348 ntBASIC5.5□□□□□ -1.53
MRE11P49959 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.5□□□□□ -1.53
MRE11P49959 AC126182.1-201ENST00000478134 357 ntBASIC5.5□□□□□ -1.53
MRE11P49959 AC090543.2-201ENST00000483963 348 ntBASIC5.5□□□□□ -1.53
MRE11P49959 AC004057.1-201ENST00000485827 348 ntBASIC5.5□□□□□ -1.53
MRE11P49959 AC006499.5-201ENST00000505037 514 ntBASIC5.5□□□□□ -1.53
MRE11P49959 AC090071.1-201ENST00000507713 644 ntBASIC5.5□□□□□ -1.53
MRE11P49959 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.5□□□□□ -1.53
MRE11P49959 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.5□□□□□ -1.53
MRE11P49959 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5.5□□□□□ -1.53
MRE11P49959 AC090151.1-201ENST00000520784 730 ntBASIC5.5□□□□□ -1.53
MRE11P49959 AP003392.2-201ENST00000527269 208 ntBASIC5.5□□□□□ -1.53
MRE11P49959 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
MRE11P49959 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.5□□□□□ -1.53
MRE11P49959 DYNLL1P4-201ENST00000549314 266 ntBASIC5.5□□□□□ -1.53
MRE11P49959 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.5□□□□□ -1.53
MRE11P49959 AC106785.1-201ENST00000565935 262 ntBASIC5.5□□□□□ -1.53
MRE11P49959 UBE2FP2-201ENST00000566646 462 ntBASIC5.5□□□□□ -1.53
MRE11P49959 AC015912.2-201ENST00000571053 181 ntBASIC5.5□□□□□ -1.53
MRE11P49959 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.5□□□□□ -1.53
MRE11P49959 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.5□□□□□ -1.53
MRE11P49959 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
MRE11P49959 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.5□□□□□ -1.53
MRE11P49959 AC068276.1-201ENST00000605793 379 ntBASIC5.5□□□□□ -1.53
MRE11P49959 AC106028.5-201ENST00000610332 395 ntBASIC5.5□□□□□ -1.53
MRE11P49959 AL353726.1-201ENST00000614041 1000 ntBASIC5.5□□□□□ -1.53
MRE11P49959 AL356274.1-201ENST00000617064 410 ntBASIC5.5□□□□□ -1.53
MRE11P49959 AC099494.2-201ENST00000623371 978 ntBASIC5.5□□□□□ -1.53
MRE11P49959 AC005609.4-201ENST00000625071 447 ntBASIC5.5□□□□□ -1.53
MRE11P49959 CYP4F35P-202ENST00000636121 390 ntBASIC5.5□□□□□ -1.53
MRE11P49959 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.5□□□□□ -1.53
MRE11P49959 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.5□□□□□ -1.53
MRE11P49959 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
MRE11P49959 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
MRE11P49959 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
MRE11P49959 AC004520.1-201ENST00000608362 1413 ntBASIC5.49□□□□□ -1.53
MRE11P49959 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
MRE11P49959 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
MRE11P49959 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
MRE11P49959 RNU6-666P-201ENST00000363499 107 ntBASIC5.49□□□□□ -1.53
MRE11P49959 RNA5SP387-201ENST00000364226 106 ntBASIC5.49□□□□□ -1.53
MRE11P49959 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.49□□□□□ -1.53
MRE11P49959 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
MRE11P49959 SNORA70.10-201ENST00000384515 134 ntBASIC5.49□□□□□ -1.53
MRE11P49959 RNY3P10-201ENST00000384764 102 ntBASIC5.49□□□□□ -1.53
MRE11P49959 SNORA68.2-201ENST00000391263 128 ntBASIC5.49□□□□□ -1.53
MRE11P49959 PIGPP2-201ENST00000411569 458 ntBASIC5.49□□□□□ -1.53
MRE11P49959 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.49□□□□□ -1.53
MRE11P49959 AC008280.1-201ENST00000418851 412 ntBASIC5.49□□□□□ -1.53
MRE11P49959 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.49□□□□□ -1.53
MRE11P49959 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.49□□□□□ -1.53
MRE11P49959 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.49□□□□□ -1.53
MRE11P49959 RPS25P9-201ENST00000435591 252 ntBASIC5.49□□□□□ -1.53
MRE11P49959 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.49□□□□□ -1.53
MRE11P49959 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.49□□□□□ -1.53
MRE11P49959 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
MRE11P49959 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.49□□□□□ -1.53
MRE11P49959 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.49□□□□□ -1.53
MRE11P49959 AC020593.1-201ENST00000507399 299 ntBASIC5.49□□□□□ -1.53
MRE11P49959 AC008694.2-201ENST00000517591 306 ntBASIC5.49□□□□□ -1.53
MRE11P49959 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC5.49□□□□□ -1.53
MRE11P49959 AC021006.3-201ENST00000530771 192 ntBASIC5.49□□□□□ -1.53
MRE11P49959 AP002812.4-201ENST00000532139 286 ntBASIC5.49□□□□□ -1.53
MRE11P49959 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.49□□□□□ -1.53
MRE11P49959 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.49□□□□□ -1.53
MRE11P49959 OR7K1P-201ENST00000546439 926 ntBASIC5.49□□□□□ -1.53
MRE11P49959 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.49□□□□□ -1.53
MRE11P49959 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.49□□□□□ -1.53
MRE11P49959 AC053481.3-201ENST00000577881 843 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms