Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.24□□□□□ -1.89
CSNK1A1P48729 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.24□□□□□ -1.89
CSNK1A1P48729 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.24□□□□□ -1.89
CSNK1A1P48729 MIR3186-201ENST00000577404 85 ntBASIC3.24□□□□□ -1.89
CSNK1A1P48729 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.24□□□□□ -1.89
CSNK1A1P48729 AC006254.3-201ENST00000603353 884 ntBASIC3.24□□□□□ -1.89
CSNK1A1P48729 AL391497.1-201ENST00000608671 547 ntBASIC3.24□□□□□ -1.89
CSNK1A1P48729 MIR8058-201ENST00000615737 89 ntBASIC3.24□□□□□ -1.89
CSNK1A1P48729 AL732618.1-201ENST00000623251 301 ntBASIC3.24□□□□□ -1.89
CSNK1A1P48729 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.24□□□□□ -1.89
CSNK1A1P48729 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.24□□□□□ -1.89
CSNK1A1P48729 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CSNK1A1P48729 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.24□□□□□ -1.89
CSNK1A1P48729 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CSNK1A1P48729 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CSNK1A1P48729 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CSNK1A1P48729 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CSNK1A1P48729 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
CSNK1A1P48729 PABPC1P7-201ENST00000413177 1513 ntBASIC3.24□□□□□ -1.89
CSNK1A1P48729 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CSNK1A1P48729 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CSNK1A1P48729 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CSNK1A1P48729 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CSNK1A1P48729 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CSNK1A1P48729 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 SNORA51.2-201ENST00000364595 132 ntBASIC3.23□□□□□ -1.89
CSNK1A1P48729 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CSNK1A1P48729 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CSNK1A1P48729 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 RPL7P60-201ENST00000397636 735 ntBASIC3.23□□□□□ -1.89
CSNK1A1P48729 MIR1303-201ENST00000408625 86 ntBASIC3.23□□□□□ -1.89
CSNK1A1P48729 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 AL049610.1-201ENST00000423374 372 ntBASIC3.23□□□□□ -1.89
CSNK1A1P48729 AC006989.1-201ENST00000427212 131 ntBASIC3.23□□□□□ -1.89
CSNK1A1P48729 AL590762.3-201ENST00000436372 640 ntBASIC3.23□□□□□ -1.89
CSNK1A1P48729 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 MTND2P30-201ENST00000456663 382 ntBASIC3.23□□□□□ -1.89
CSNK1A1P48729 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 RNU6-1231P-201ENST00000517185 103 ntBASIC3.23□□□□□ -1.89
CSNK1A1P48729 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 AC023161.2-201ENST00000551218 780 ntBASIC3.23□□□□□ -1.89
CSNK1A1P48729 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 RNU1-30P-201ENST00000606575 163 ntBASIC3.23□□□□□ -1.89
CSNK1A1P48729 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
CSNK1A1P48729 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CSNK1A1P48729 AC046144.1-201ENST00000478559 1853 ntBASIC3.22□□□□□ -1.89
CSNK1A1P48729 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CSNK1A1P48729 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CSNK1A1P48729 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CSNK1A1P48729 AL512646.1-201ENST00000269395 1077 ntBASIC3.22□□□□□ -1.89
CSNK1A1P48729 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CSNK1A1P48729 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.22□□□□□ -1.89
CSNK1A1P48729 SNORA51.12-201ENST00000384448 134 ntBASIC3.22□□□□□ -1.89
CSNK1A1P48729 RNU6-796P-201ENST00000391086 107 ntBASIC3.22□□□□□ -1.89
CSNK1A1P48729 USP9YP19-201ENST00000412165 485 ntBASIC3.22□□□□□ -1.89
CSNK1A1P48729 AC244098.2-201ENST00000422068 99 ntBASIC3.22□□□□□ -1.89
CSNK1A1P48729 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.22□□□□□ -1.89
CSNK1A1P48729 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.22□□□□□ -1.89
CSNK1A1P48729 AC073508.1-201ENST00000428866 656 ntBASIC3.22□□□□□ -1.89
CSNK1A1P48729 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.22□□□□□ -1.89
CSNK1A1P48729 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.22□□□□□ -1.89
CSNK1A1P48729 MTCYBP31-201ENST00000438855 1122 ntBASIC3.22□□□□□ -1.89
CSNK1A1P48729 AL645931.1-201ENST00000439737 410 ntBASIC3.22□□□□□ -1.89
CSNK1A1P48729 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.22□□□□□ -1.89
CSNK1A1P48729 RNFT1P2-201ENST00000443064 757 ntBASIC3.22□□□□□ -1.89
CSNK1A1P48729 RPS27P5-201ENST00000444247 244 ntBASIC3.22□□□□□ -1.89
CSNK1A1P48729 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.22□□□□□ -1.89
CSNK1A1P48729 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CSNK1A1P48729 AC239367.2-201ENST00000447309 705 ntBASIC3.22□□□□□ -1.89
CSNK1A1P48729 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.22□□□□□ -1.89
CSNK1A1P48729 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.22□□□□□ -1.89
CSNK1A1P48729 AL353718.1-201ENST00000451028 517 ntBASIC3.22□□□□□ -1.89
CSNK1A1P48729 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.22□□□□□ -1.89
CSNK1A1P48729 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.22□□□□□ -1.89
CSNK1A1P48729 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CSNK1A1P48729 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.22□□□□□ -1.89
CSNK1A1P48729 AC010468.3-201ENST00000508225 458 ntBASIC3.22□□□□□ -1.89
CSNK1A1P48729 RPL7L1P13-201ENST00000511702 739 ntBASIC3.22□□□□□ -1.89
CSNK1A1P48729 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.22□□□□□ -1.89
CSNK1A1P48729 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.22□□□□□ -1.89
CSNK1A1P48729 AC133963.2-201ENST00000513686 578 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms