Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 Y_RNA.625-201ENST00000411256 107 ntBASIC3.64□□□□□ -1.83
CDX1P47902 FAR2P2-201ENST00000413041 594 ntBASIC3.64□□□□□ -1.83
CDX1P47902 AC092647.1-201ENST00000420654 287 ntBASIC3.64□□□□□ -1.83
CDX1P47902 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.64□□□□□ -1.83
CDX1P47902 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDX1P47902 FAR2P4-202ENST00000425399 584 ntBASIC3.64□□□□□ -1.83
CDX1P47902 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.64□□□□□ -1.83
CDX1P47902 USP9YP11-201ENST00000427537 717 ntBASIC3.64□□□□□ -1.83
CDX1P47902 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDX1P47902 AC068287.1-201ENST00000430283 295 ntBASIC3.64□□□□□ -1.83
CDX1P47902 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.64□□□□□ -1.83
CDX1P47902 SLC31A1P1-201ENST00000451221 567 ntBASIC3.64□□□□□ -1.83
CDX1P47902 RPL21P134-201ENST00000453468 483 ntBASIC3.64□□□□□ -1.83
CDX1P47902 AC079168.2-201ENST00000453977 416 ntBASIC3.64□□□□□ -1.83
CDX1P47902 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.64□□□□□ -1.83
CDX1P47902 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CDX1P47902 RPL12P20-201ENST00000475538 479 ntBASIC3.64□□□□□ -1.83
CDX1P47902 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.64□□□□□ -1.83
CDX1P47902 AC078817.1-201ENST00000492623 435 ntBASIC3.64□□□□□ -1.83
CDX1P47902 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.64□□□□□ -1.83
CDX1P47902 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.64□□□□□ -1.83
CDX1P47902 MTND4LP2-201ENST00000502312 285 ntBASIC3.64□□□□□ -1.83
CDX1P47902 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.64□□□□□ -1.83
CDX1P47902 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.64□□□□□ -1.83
CDX1P47902 WBP1LP4-201ENST00000505043 344 ntBASIC3.64□□□□□ -1.83
CDX1P47902 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.64□□□□□ -1.83
CDX1P47902 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.64□□□□□ -1.83
CDX1P47902 AC079395.1-201ENST00000510981 262 ntBASIC3.64□□□□□ -1.83
CDX1P47902 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.64□□□□□ -1.83
CDX1P47902 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.64□□□□□ -1.83
CDX1P47902 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.64□□□□□ -1.83
CDX1P47902 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.64□□□□□ -1.83
CDX1P47902 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.64□□□□□ -1.83
CDX1P47902 IGKV2D-23-201ENST00000518179 286 ntBASIC3.64□□□□□ -1.83
CDX1P47902 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.64□□□□□ -1.83
CDX1P47902 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.64□□□□□ -1.83
CDX1P47902 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.64□□□□□ -1.83
CDX1P47902 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.64□□□□□ -1.83
CDX1P47902 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.64□□□□□ -1.83
CDX1P47902 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.64□□□□□ -1.83
CDX1P47902 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.64□□□□□ -1.83
CDX1P47902 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.64□□□□□ -1.83
CDX1P47902 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDX1P47902 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.64□□□□□ -1.83
CDX1P47902 CBX3P5-201ENST00000552017 521 ntBASIC3.64□□□□□ -1.83
CDX1P47902 AC007424.1-203ENST00000554613 687 ntBASIC3.64□□□□□ -1.83
CDX1P47902 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.64□□□□□ -1.83
CDX1P47902 AL133457.1-201ENST00000564251 987 ntBASIC3.64□□□□□ -1.83
CDX1P47902 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.64□□□□□ -1.83
CDX1P47902 OR4K7P-201ENST00000580232 945 ntBASIC3.64□□□□□ -1.83
CDX1P47902 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.64□□□□□ -1.83
CDX1P47902 BNIP3P24-201ENST00000593398 557 ntBASIC3.64□□□□□ -1.83
CDX1P47902 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.64□□□□□ -1.83
CDX1P47902 MRPS35P3-201ENST00000603189 709 ntBASIC3.64□□□□□ -1.83
CDX1P47902 AC131235.4-201ENST00000609288 620 ntBASIC3.64□□□□□ -1.83
CDX1P47902 AC006329.2-201ENST00000611491 394 ntBASIC3.64□□□□□ -1.83
CDX1P47902 uc_338.32-201ENST00000615087 172 ntBASIC3.64□□□□□ -1.83
CDX1P47902 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.64□□□□□ -1.83
CDX1P47902 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.64□□□□□ -1.83
CDX1P47902 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.64□□□□□ -1.83
CDX1P47902 MIR7641-1-201ENST00000627518 61 ntBASIC3.64□□□□□ -1.83
CDX1P47902 AC116618.1-201ENST00000634617 774 ntBASIC3.64□□□□□ -1.83
CDX1P47902 AC138649.5-201ENST00000637456 137 ntBASIC3.64□□□□□ -1.83
CDX1P47902 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.64□□□□□ -1.83
CDX1P47902 AC125257.1-201ENST00000560400 2930 ntBASIC3.64□□□□□ -1.83
CDX1P47902 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.64□□□□□ -1.83
CDX1P47902 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
CDX1P47902 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.64□□□□□ -1.83
CDX1P47902 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDX1P47902 MTCO1P23-201ENST00000415223 1526 ntBASIC3.64□□□□□ -1.83
CDX1P47902 NUP58P1-201ENST00000502546 1738 ntBASIC3.64□□□□□ -1.83
CDX1P47902 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.64□□□□□ -1.83
CDX1P47902 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDX1P47902 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDX1P47902 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.63□□□□□ -1.83
CDX1P47902 HSPA8P1-201ENST00000425843 1833 ntBASIC3.63□□□□□ -1.83
CDX1P47902 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.63□□□□□ -1.83
CDX1P47902 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDX1P47902 FAM91A3P-201ENST00000456826 2544 ntBASIC3.63□□□□□ -1.83
CDX1P47902 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CDX1P47902 RNU6-989P-201ENST00000362756 107 ntBASIC3.63□□□□□ -1.83
CDX1P47902 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDX1P47902 SNORA56-201ENST00000383966 129 ntBASIC3.63□□□□□ -1.83
CDX1P47902 RNU1-89P-201ENST00000384592 164 ntBASIC3.63□□□□□ -1.83
CDX1P47902 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CDX1P47902 SDHCP2-201ENST00000398565 501 ntBASIC3.63□□□□□ -1.83
CDX1P47902 FCF1P5-201ENST00000406490 482 ntBASIC3.63□□□□□ -1.83
CDX1P47902 RNA5SP306-201ENST00000411087 107 ntBASIC3.63□□□□□ -1.83
CDX1P47902 AC068533.2-201ENST00000411872 306 ntBASIC3.63□□□□□ -1.83
CDX1P47902 TIMM9P2-201ENST00000419324 266 ntBASIC3.63□□□□□ -1.83
CDX1P47902 AC069213.2-201ENST00000420238 366 ntBASIC3.63□□□□□ -1.83
CDX1P47902 AC012065.2-201ENST00000421295 375 ntBASIC3.63□□□□□ -1.83
CDX1P47902 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.63□□□□□ -1.83
CDX1P47902 AL513174.1-201ENST00000423182 629 ntBASIC3.63□□□□□ -1.83
CDX1P47902 CENPIP1-201ENST00000425713 902 ntBASIC3.63□□□□□ -1.83
CDX1P47902 AC073335.1-201ENST00000427776 363 ntBASIC3.63□□□□□ -1.83
CDX1P47902 DNAJC19P7-201ENST00000428811 344 ntBASIC3.63□□□□□ -1.83
CDX1P47902 RPL23AP74-201ENST00000437246 471 ntBASIC3.63□□□□□ -1.83
CDX1P47902 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.63□□□□□ -1.83
CDX1P47902 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms