Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CD74P04233 CYCSP53-201ENST00000455540 265 ntBASIC3.05□□□□□ -1.92
CD74P04233 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.05□□□□□ -1.92
CD74P04233 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.05□□□□□ -1.92
CD74P04233 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CD74P04233 AC020898.1-201ENST00000474167 787 ntBASIC3.05□□□□□ -1.92
CD74P04233 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CD74P04233 AC110792.1-201ENST00000491826 472 ntBASIC3.05□□□□□ -1.92
CD74P04233 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.05□□□□□ -1.92
CD74P04233 TMEM248P1-201ENST00000510579 951 ntBASIC3.05□□□□□ -1.92
CD74P04233 SETP12-201ENST00000514068 805 ntBASIC3.05□□□□□ -1.92
CD74P04233 MIR2276-201ENST00000516886 89 ntBASIC3.05□□□□□ -1.92
CD74P04233 RPL12P22-201ENST00000519073 490 ntBASIC3.05□□□□□ -1.92
CD74P04233 COX6B1P6-201ENST00000522347 255 ntBASIC3.05□□□□□ -1.92
CD74P04233 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.05□□□□□ -1.92
CD74P04233 AC026333.2-201ENST00000542164 106 ntBASIC3.05□□□□□ -1.92
CD74P04233 AC004024.1-201ENST00000549244 247 ntBASIC3.05□□□□□ -1.92
CD74P04233 AC023161.2-201ENST00000551218 780 ntBASIC3.05□□□□□ -1.92
CD74P04233 AC025884.1-201ENST00000556034 378 ntBASIC3.05□□□□□ -1.92
CD74P04233 LINC00557-201ENST00000563184 1279 ntBASIC3.05□□□□□ -1.92
CD74P04233 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.05□□□□□ -1.92
CD74P04233 ARF4P1-201ENST00000605447 541 ntBASIC3.05□□□□□ -1.92
CD74P04233 AC113194.1-201ENST00000606037 500 ntBASIC3.05□□□□□ -1.92
CD74P04233 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CD74P04233 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.05□□□□□ -1.92
CD74P04233 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CD74P04233 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CD74P04233 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CD74P04233 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.05□□□□□ -1.92
CD74P04233 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.04□□□□□ -1.92
CD74P04233 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CD74P04233 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
CD74P04233 AC007656.2-201ENST00000624902 4547 ntBASIC3.04□□□□□ -1.92
CD74P04233 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CD74P04233 MFSD8-236ENST00000641509 4050 ntBASIC3.04□□□□□ -1.92
CD74P04233 SAGE4P-201ENST00000442271 3381 ntBASIC3.04□□□□□ -1.92
CD74P04233 RNA5SP515-201ENST00000364570 118 ntBASIC3.04□□□□□ -1.92
CD74P04233 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CD74P04233 MIR1250-201ENST00000408098 113 ntBASIC3.04□□□□□ -1.92
CD74P04233 RNU2-17P-201ENST00000410290 190 ntBASIC3.04□□□□□ -1.92
CD74P04233 MTND4P22-201ENST00000413116 1169 ntBASIC3.04□□□□□ -1.92
CD74P04233 AC093578.1-201ENST00000415219 368 ntBASIC3.04□□□□□ -1.92
CD74P04233 LINC01347-201ENST00000417964 355 ntBASIC3.04□□□□□ -1.92
CD74P04233 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.04□□□□□ -1.92
CD74P04233 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CD74P04233 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.04□□□□□ -1.92
CD74P04233 RPL23AP22-201ENST00000437556 453 ntBASIC3.04□□□□□ -1.92
CD74P04233 AL357552.1-201ENST00000445254 415 ntBASIC3.04□□□□□ -1.92
CD74P04233 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.04□□□□□ -1.92
CD74P04233 AC125238.1-201ENST00000448842 249 ntBASIC3.04□□□□□ -1.92
CD74P04233 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.04□□□□□ -1.92
CD74P04233 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.04□□□□□ -1.92
CD74P04233 RPL5P24-201ENST00000463742 885 ntBASIC3.04□□□□□ -1.92
CD74P04233 AC105137.1-201ENST00000484355 562 ntBASIC3.04□□□□□ -1.92
CD74P04233 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.04□□□□□ -1.92
CD74P04233 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.04□□□□□ -1.92
CD74P04233 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.04□□□□□ -1.92
CD74P04233 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.04□□□□□ -1.92
CD74P04233 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CD74P04233 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.04□□□□□ -1.92
CD74P04233 DUXAP6-201ENST00000553858 601 ntBASIC3.04□□□□□ -1.92
CD74P04233 AL121594.4-201ENST00000556211 1196 ntBASIC3.04□□□□□ -1.92
CD74P04233 AC010735.1-201ENST00000567305 1026 ntBASIC3.04□□□□□ -1.92
CD74P04233 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.04□□□□□ -1.92
CD74P04233 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.04□□□□□ -1.92
CD74P04233 AC009948.4-201ENST00000604692 675 ntBASIC3.04□□□□□ -1.92
CD74P04233 AC005156.1-201ENST00000613371 573 ntBASIC3.04□□□□□ -1.92
CD74P04233 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.04□□□□□ -1.92
CD74P04233 AC112200.1-201ENST00000625015 234 ntBASIC3.04□□□□□ -1.92
CD74P04233 SNORA50A-202ENST00000629536 136 ntBASIC3.04□□□□□ -1.92
CD74P04233 MIR492-201ENST00000638676 116 ntBASIC3.04□□□□□ -1.92
CD74P04233 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
CD74P04233 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CD74P04233 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CD74P04233 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CD74P04233 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CD74P04233 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CD74P04233 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
CD74P04233 XPOTP1-201ENST00000443317 2398 ntBASIC3.03□□□□□ -1.92
CD74P04233 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.03□□□□□ -1.92
CD74P04233 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CD74P04233 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CD74P04233 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.03□□□□□ -1.92
CD74P04233 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CD74P04233 AL355379.1-201ENST00000405542 640 ntBASIC3.03□□□□□ -1.92
CD74P04233 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.03□□□□□ -1.92
CD74P04233 RPS15AP40-201ENST00000419621 391 ntBASIC3.03□□□□□ -1.92
CD74P04233 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.03□□□□□ -1.92
CD74P04233 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.03□□□□□ -1.92
CD74P04233 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.03□□□□□ -1.92
CD74P04233 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.03□□□□□ -1.92
CD74P04233 AC097499.1-201ENST00000444277 208 ntBASIC3.03□□□□□ -1.92
CD74P04233 AC069540.1-201ENST00000446320 988 ntBASIC3.03□□□□□ -1.92
CD74P04233 AL590399.6-201ENST00000446396 307 ntBASIC3.03□□□□□ -1.92
CD74P04233 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.03□□□□□ -1.92
CD74P04233 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.03□□□□□ -1.92
CD74P04233 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.03□□□□□ -1.92
CD74P04233 AC007967.1-201ENST00000455422 1159 ntBASIC3.03□□□□□ -1.92
CD74P04233 NF1P3-201ENST00000457709 450 ntBASIC3.03□□□□□ -1.92
CD74P04233 AP002884.2-201ENST00000471647 395 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms