Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 MTCYBP29-201ENST00000436327 1006 ntBASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 CYCSP32-201ENST00000440548 321 ntBASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC005229.2-201ENST00000456995 399 ntBASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 RPL5P24-201ENST00000463742 885 ntBASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC073522.1-201ENST00000483312 377 ntBASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 SCARNA13-201ENST00000516672 275 ntBASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 RN7SKP209-201ENST00000516888 304 ntBASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 ABI1P1-201ENST00000603375 1120 ntBASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 RPL21P136-201ENST00000605378 396 ntBASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC019131.2-201ENST00000609071 870 ntBASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC009318.3-201ENST00000616916 503 ntBASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC079684.1-201ENST00000621405 437 ntBASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 MIR3651-201ENST00000630427 90 ntBASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC007823.1-201ENST00000569932 1566 ntBASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC110792.3-201ENST00000595906 1614 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 MFSD8-236ENST00000641509 4050 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 MIR30E-201ENST00000362104 92 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 RNU6-31P-201ENST00000384388 108 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 BTF3P9-201ENST00000418784 283 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 ARL2BPP3-201ENST00000421226 480 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 RPL31P12-201ENST00000422587 358 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC073069.1-201ENST00000428657 441 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 BX679664.1-201ENST00000434429 253 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 NDUFB1P1-201ENST00000435191 180 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 AL353898.1-201ENST00000444055 238 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 RPL5P13-201ENST00000462840 709 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 CABYRP1-201ENST00000465493 1045 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC104629.2-201ENST00000468627 598 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 AP001086.1-201ENST00000494882 321 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 SUMO1P1-201ENST00000497904 306 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC025768.1-201ENST00000510057 267 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 HMGB1P47-201ENST00000511281 589 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 SMARCE1P4-201ENST00000523647 241 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 AL139174.1-201ENST00000531489 886 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC007458.1-201ENST00000542812 373 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 NOP56P3-201ENST00000549457 385 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 VN1R84P-201ENST00000593697 235 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 VN1R92P-201ENST00000598511 928 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC006077.1-201ENST00000604746 343 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC135178.6-201ENST00000605314 398 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 MIR8058-201ENST00000615737 89 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC097372.4-201ENST00000625025 466 ntBASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.44□□□□□ -1.86
TMX2-CTNND1H3BSU7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC009501.3-201ENST00000605001 1352 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 AL512283.1-201ENST00000606756 1384 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 ZNF826P-207ENST00000622273 1910 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 MIR490-201ENST00000384865 128 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 RNU6-328P-201ENST00000390887 106 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 SOD2P1-201ENST00000396543 562 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 GSTA12P-201ENST00000402398 508 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 MTHFD2P2-201ENST00000407725 247 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 HMGB3P20-201ENST00000417997 600 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 RPS15AP6-201ENST00000420703 385 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 HSFY1P1-201ENST00000423928 1178 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 RPF2P1-201ENST00000424137 906 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC073508.1-201ENST00000428866 656 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 MTND2P2-201ENST00000434633 945 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms