Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 Z73965.1-201ENST00000623412 2297 ntBASIC4.23□□□□□ -1.73
CGB1A6NKQ9 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AC009951.1-201ENST00000623674 2614 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 Y_RNA.1-201ENST00000352915 104 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 SNORD56.2-201ENST00000363242 71 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 RNU6-1085P-201ENST00000363576 107 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 RNU6-444P-201ENST00000383988 108 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 RNU6-1293P-201ENST00000384077 107 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 BX295541.1-201ENST00000417774 250 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 NPM1P34-201ENST00000428821 893 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 FCF1P1-201ENST00000432690 571 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 SKP1P1-201ENST00000438081 489 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 MTND6P13-201ENST00000443510 523 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 GAPDHP25-201ENST00000447061 1001 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 SLC31A1P1-201ENST00000451221 567 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 RPS15AP1-201ENST00000457423 391 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 NF1P3-201ENST00000457709 450 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AC087312.1-201ENST00000471411 480 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AC012170.1-201ENST00000495139 359 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AC090638.1-201ENST00000498296 909 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 Y_RNA.693-201ENST00000516641 110 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 RN7SKP99-201ENST00000517028 307 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AC027309.2-201ENST00000520566 192 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AC015720.2-201ENST00000567709 334 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AC022884.2-201ENST00000578535 580 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 BNIP3P23-201ENST00000599655 511 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AL162431.4-201ENST00000604674 411 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AP000942.4-201ENST00000604811 241 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 RNA5SP440-201ENST00000612665 119 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 RNU6-156P-201ENST00000621869 107 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AC090574.1-201ENST00000623186 233 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AC231657.1-201ENST00000624313 397 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 AC138915.3-201ENST00000562908 1389 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 MTND5P28-201ENST00000438005 1594 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 EIF2AP4-201ENST00000424793 1781 ntBASIC4.22□□□□□ -1.73
CGB1A6NKQ9 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.22□□□□□ -1.73
CGB1A6NKQ9 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
CGB1A6NKQ9 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CGB1A6NKQ9 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CGB1A6NKQ9 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
CGB1A6NKQ9 AC025125.1-201ENST00000624743 1922 ntBASIC4.21□□□□□ -1.74
CGB1A6NKQ9 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CGB1A6NKQ9 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CGB1A6NKQ9 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CGB1A6NKQ9 OR4A15-201ENST00000314706 1035 ntBASIC4.21□□□□□ -1.74
CGB1A6NKQ9 Y_RNA.142-201ENST00000363491 102 ntBASIC4.21□□□□□ -1.74
CGB1A6NKQ9 RNA5SP335-201ENST00000363817 110 ntBASIC4.21□□□□□ -1.74
CGB1A6NKQ9 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CGB1A6NKQ9 RNU6-483P-201ENST00000384088 108 ntBASIC4.21□□□□□ -1.74
CGB1A6NKQ9 RNU6-533P-201ENST00000384144 107 ntBASIC4.21□□□□□ -1.74
CGB1A6NKQ9 RNU6-1103P-201ENST00000384150 107 ntBASIC4.21□□□□□ -1.74
CGB1A6NKQ9 Y_RNA.529-201ENST00000384586 119 ntBASIC4.21□□□□□ -1.74
CGB1A6NKQ9 MIR589-201ENST00000385238 99 ntBASIC4.21□□□□□ -1.74
CGB1A6NKQ9 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
CGB1A6NKQ9 DSTNP4-201ENST00000399472 474 ntBASIC4.21□□□□□ -1.74
CGB1A6NKQ9 AL078604.1-201ENST00000404609 466 ntBASIC4.21□□□□□ -1.74
CGB1A6NKQ9 AL590004.1-201ENST00000405321 300 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 212.6 ms