Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 OR6C73P-201ENST00000546432 358 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 AC091515.1-201ENST00000548110 679 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 MIR4644-201ENST00000579929 84 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 VN1R87P-201ENST00000596706 487 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 AC007566.2-201ENST00000603642 413 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 AL158050.2-201ENST00000605336 568 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 VN1R74P-201ENST00000613259 503 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 PABPC1P7-201ENST00000413177 1513 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 DBF4P1-201ENST00000412976 1892 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 AP002001.2-201ENST00000529025 1469 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 AC027287.1-201ENST00000553115 1453 ntBASIC3.73□□□□□ -1.81
ATG4BQ9Y4P1 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 AC008725.1-201ENST00000605123 2263 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 RN7SKP280-201ENST00000364196 304 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 RPL7P27-201ENST00000403775 720 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 RNA5SP239-201ENST00000410218 129 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 RPS6P14-201ENST00000425165 719 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 OR8F1P-201ENST00000425243 930 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 AC096638.2-201ENST00000434965 711 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 RANP8-201ENST00000444720 713 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 FCF1P6-201ENST00000456841 595 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 RNU6-202P-201ENST00000515998 96 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 Vault.1-201ENST00000516474 102 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 NDUFA5P2-201ENST00000519723 344 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 AC087369.1-201ENST00000520775 996 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 RFPL1S-203ENST00000539579 330 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 ZNF971P-201ENST00000562068 1249 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 MIR4666A-201ENST00000580160 79 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 MIR4286-201ENST00000580651 93 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 Z82195.1-201ENST00000604558 398 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 AC002487.1-201ENST00000604565 994 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 AC092953.2-201ENST00000608000 699 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 AC097504.2-201ENST00000608088 454 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 AC099676.1-201ENST00000608886 657 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 MIR6875-201ENST00000617506 72 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 AL139089.1-201ENST00000620372 975 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 AC009269.6-201ENST00000621778 588 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 AC004808.1-201ENST00000627671 721 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 AC099654.8-201ENST00000637757 681 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 AC013437.2-201ENST00000639587 677 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 MTND5P31-201ENST00000419366 1374 ntBASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATG4BQ9Y4P1 MAPK10-373ENST00000641983 6772 ntBASIC3.71□□□□□ -1.81
ATG4BQ9Y4P1 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.71□□□□□ -1.81
ATG4BQ9Y4P1 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
ATG4BQ9Y4P1 AL138878.1-201ENST00000405131 347 ntBASIC3.71□□□□□ -1.82
ATG4BQ9Y4P1 ZNF603P-201ENST00000405613 487 ntBASIC3.71□□□□□ -1.82
ATG4BQ9Y4P1 MIR1250-201ENST00000408098 113 ntBASIC3.71□□□□□ -1.82
ATG4BQ9Y4P1 RN7SKP177-201ENST00000410567 355 ntBASIC3.71□□□□□ -1.82
ATG4BQ9Y4P1 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.71□□□□□ -1.82
ATG4BQ9Y4P1 AC087650.1-201ENST00000431445 468 ntBASIC3.71□□□□□ -1.82
ATG4BQ9Y4P1 AL590399.6-201ENST00000446396 307 ntBASIC3.71□□□□□ -1.82
ATG4BQ9Y4P1 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.71□□□□□ -1.82
ATG4BQ9Y4P1 AC091860.1-201ENST00000505723 432 ntBASIC3.71□□□□□ -1.82
ATG4BQ9Y4P1 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.71□□□□□ -1.82
ATG4BQ9Y4P1 AC026726.1-201ENST00000512859 601 ntBASIC3.71□□□□□ -1.82
ATG4BQ9Y4P1 AC093755.1-201ENST00000512950 1023 ntBASIC3.71□□□□□ -1.82
ATG4BQ9Y4P1 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
ATG4BQ9Y4P1 AC104057.1-201ENST00000515547 497 ntBASIC3.71□□□□□ -1.82
ATG4BQ9Y4P1 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.71□□□□□ -1.82
ATG4BQ9Y4P1 AC019227.1-201ENST00000526902 510 ntBASIC3.71□□□□□ -1.82
ATG4BQ9Y4P1 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.71□□□□□ -1.82
ATG4BQ9Y4P1 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms