Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 RNU4-26P-201ENST00000410270 107 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 RN7SKP58-201ENST00000411010 305 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 ERLEC1P1-201ENST00000433806 578 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AP000936.3-201ENST00000438127 255 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AC012512.1-201ENST00000446594 718 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 TPT1P13-201ENST00000449760 499 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 MTND3P16-201ENST00000452205 344 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 NDUFAF4P3-201ENST00000456468 525 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 Y_RNA.635-201ENST00000459041 101 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 VN1R17P-201ENST00000472048 1090 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 RN7SL570P-201ENST00000484405 292 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 RNU4-29P-201ENST00000515943 174 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AC021678.3-201ENST00000517893 476 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AP003497.1-201ENST00000528472 562 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 OR4T1P-201ENST00000554933 911 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 MRPS21P7-201ENST00000566937 238 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AL356432.3-201ENST00000568952 465 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 MIR4480-201ENST00000582492 71 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 POLR3GP2-201ENST00000588366 668 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 VN1R107P-201ENST00000601784 209 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 MIR378J-201ENST00000611988 109 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 uc_338.18-201ENST00000615451 175 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 uc_338.15-201ENST00000615470 191 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 TTC41P-205ENST00000551270 3963 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AL159987.1-201ENST00000347911 293 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 U3.2-201ENST00000362981 210 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 RNU6-343P-201ENST00000364709 104 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 RNU6-331P-201ENST00000384724 107 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 MTCYBP4-201ENST00000401524 249 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AC007568.1-201ENST00000422912 471 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AC108075.1-201ENST00000424692 529 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AL358176.2-201ENST00000425769 204 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 TCEA1P1-201ENST00000449716 880 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AL389915.2-201ENST00000454576 441 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 RPS4XP10-201ENST00000465034 731 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 RPL7AP10-201ENST00000481016 791 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AC068587.1-201ENST00000483613 781 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AC011005.3-201ENST00000491624 395 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AC106872.2-201ENST00000494303 480 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 NARSP2-201ENST00000518524 679 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 ARL6IP1P3-201ENST00000524544 560 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AP004607.2-201ENST00000533949 322 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AC006116.3-201ENST00000592968 361 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 APOOP1-201ENST00000604695 592 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AL022345.1-201ENST00000607292 135 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 FAM25E-202ENST00000608562 189 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7□□□□□ -1.29
ZC3H4Q9UPT8 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC7□□□□□ -1.29
ZC3H4Q9UPT8 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC7□□□□□ -1.29
ZC3H4Q9UPT8 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC7□□□□□ -1.29
ZC3H4Q9UPT8 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
ZC3H4Q9UPT8 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7□□□□□ -1.29
ZC3H4Q9UPT8 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC7□□□□□ -1.29
ZC3H4Q9UPT8 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
ZC3H4Q9UPT8 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
ZC3H4Q9UPT8 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7□□□□□ -1.29
ZC3H4Q9UPT8 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
ZC3H4Q9UPT8 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC7□□□□□ -1.29
ZC3H4Q9UPT8 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7□□□□□ -1.29
ZC3H4Q9UPT8 RN7SKP186-201ENST00000365371 303 ntBASIC7□□□□□ -1.29
ZC3H4Q9UPT8 Y_RNA.373-201ENST00000365600 103 ntBASIC7□□□□□ -1.29
ZC3H4Q9UPT8 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms