Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 SNORA62.6-201ENST00000606322 83 ntBASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 RNU6-1192P-201ENST00000612197 107 ntBASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 RNU6-489P-201ENST00000618289 107 ntBASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 AC126544.2-201ENST00000625174 749 ntBASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 IL6-203ENST00000401651 539 ntTSL 2 BASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 AGR3-202ENST00000402239 563 ntTSL 2 BASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 AC011242.1-201ENST00000433596 1158 ntBASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 AC069285.2-201ENST00000440210 275 ntBASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 CDC42P1-201ENST00000456658 548 ntBASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 AC104689.1-201ENST00000473356 768 ntBASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 AC097462.2-201ENST00000504623 481 ntBASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 RN7SKP96-201ENST00000516948 297 ntBASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 LY96-202ENST00000518893 430 ntTSL 3 BASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 AC090666.1-201ENST00000578241 445 ntBASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 AL392112.1-201ENST00000605115 829 ntBASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 AP002802.2-201ENST00000605877 235 ntBASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 BNIP3P41-202ENST00000616656 861 ntBASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC7.11□□□□□ -1.27
SHROOM4Q9ULL8 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SHROOM4Q9ULL8 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
SHROOM4Q9ULL8 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
SHROOM4Q9ULL8 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHROOM4Q9ULL8 SNORA48.5-201ENST00000391143 135 ntBASIC7.1□□□□□ -1.27
SHROOM4Q9ULL8 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC7.1□□□□□ -1.27
SHROOM4Q9ULL8 ATP5JP1-201ENST00000431631 322 ntBASIC7.1□□□□□ -1.27
SHROOM4Q9ULL8 AC105402.2-201ENST00000438503 358 ntBASIC7.1□□□□□ -1.27
SHROOM4Q9ULL8 AL357520.1-201ENST00000441557 453 ntBASIC7.1□□□□□ -1.27
SHROOM4Q9ULL8 AL929288.2-201ENST00000446368 407 ntBASIC7.1□□□□□ -1.27
SHROOM4Q9ULL8 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC7.1□□□□□ -1.27
SHROOM4Q9ULL8 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC7.1□□□□□ -1.27
SHROOM4Q9ULL8 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC7.1□□□□□ -1.27
SHROOM4Q9ULL8 AC096992.1-201ENST00000459808 709 ntBASIC7.1□□□□□ -1.27
SHROOM4Q9ULL8 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC7.1□□□□□ -1.27
SHROOM4Q9ULL8 AC011037.1-201ENST00000483964 558 ntBASIC7.1□□□□□ -1.27
SHROOM4Q9ULL8 SNORA70.18-201ENST00000516696 98 ntBASIC7.1□□□□□ -1.27
SHROOM4Q9ULL8 FTH1P11-201ENST00000517577 551 ntBASIC7.1□□□□□ -1.27
SHROOM4Q9ULL8 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHROOM4Q9ULL8 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC7.1□□□□□ -1.27
SHROOM4Q9ULL8 AC007275.1-201ENST00000621243 671 ntBASIC7.1□□□□□ -1.27
SHROOM4Q9ULL8 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC7.1□□□□□ -1.27
SHROOM4Q9ULL8 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC7.1□□□□□ -1.27
SHROOM4Q9ULL8 AC007823.1-201ENST00000569932 1566 ntBASIC7.1□□□□□ -1.27
SHROOM4Q9ULL8 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC7.09□□□□□ -1.27
SHROOM4Q9ULL8 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
SHROOM4Q9ULL8 AL365440.1-201ENST00000436135 2167 ntBASIC7.09□□□□□ -1.27
SHROOM4Q9ULL8 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SHROOM4Q9ULL8 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC7.09□□□□□ -1.27
SHROOM4Q9ULL8 RPL21P110-201ENST00000433345 446 ntBASIC7.09□□□□□ -1.27
SHROOM4Q9ULL8 RPS7P2-201ENST00000435134 607 ntBASIC7.09□□□□□ -1.27
SHROOM4Q9ULL8 AL050341.1-201ENST00000447743 313 ntBASIC7.09□□□□□ -1.27
SHROOM4Q9ULL8 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC7.09□□□□□ -1.27
SHROOM4Q9ULL8 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC7.09□□□□□ -1.27
SHROOM4Q9ULL8 AC139103.1-201ENST00000534696 1030 ntBASIC7.09□□□□□ -1.27
SHROOM4Q9ULL8 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC7.09□□□□□ -1.27
SHROOM4Q9ULL8 AC008011.1-201ENST00000545989 227 ntBASIC7.09□□□□□ -1.27
SHROOM4Q9ULL8 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC7.09□□□□□ -1.27
SHROOM4Q9ULL8 AC116312.1-201ENST00000606841 314 ntBASIC7.09□□□□□ -1.27
SHROOM4Q9ULL8 AL139089.1-201ENST00000620372 975 ntBASIC7.09□□□□□ -1.27
SHROOM4Q9ULL8 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.28
SHROOM4Q9ULL8 SAGE2P-201ENST00000420011 2126 ntBASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 RNU5B-1-201ENST00000363286 116 ntBASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 MIR513A2-201ENST00000385249 127 ntBASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 UBA52P6-201ENST00000399822 382 ntBASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 TRIM60P5Y-201ENST00000413946 574 ntBASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 RPL30P3-201ENST00000424262 333 ntBASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 TRIM60P3Y-201ENST00000432201 673 ntBASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 AC023347.2-201ENST00000433994 462 ntBASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 AC004865.1-201ENST00000442276 1003 ntBASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 RSL24D1P3-201ENST00000449255 495 ntBASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 AC073522.1-201ENST00000483312 377 ntBASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 RPL5P23-201ENST00000496040 868 ntBASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 RNU2-27P-201ENST00000516185 142 ntBASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 AC013468.1-201ENST00000608680 598 ntBASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SHROOM4Q9ULL8 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms