Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
CISHQ9NSE2 EXOC5P1-201ENST00000510543 1969 ntBASIC3.33□□□□□ -1.88
CISHQ9NSE2 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.33□□□□□ -1.88
CISHQ9NSE2 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CISHQ9NSE2 RNU6-697P-201ENST00000363348 107 ntBASIC3.33□□□□□ -1.88
CISHQ9NSE2 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CISHQ9NSE2 AC007899.1-201ENST00000412776 775 ntBASIC3.33□□□□□ -1.88
CISHQ9NSE2 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.33□□□□□ -1.88
CISHQ9NSE2 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC3.33□□□□□ -1.88
CISHQ9NSE2 UBE2V1P1-201ENST00000430836 445 ntBASIC3.33□□□□□ -1.88
CISHQ9NSE2 RPS12P18-201ENST00000442381 270 ntBASIC3.33□□□□□ -1.88
CISHQ9NSE2 AC104978.1-201ENST00000449387 391 ntBASIC3.33□□□□□ -1.88
CISHQ9NSE2 AC010468.1-201ENST00000461022 817 ntBASIC3.33□□□□□ -1.88
CISHQ9NSE2 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.33□□□□□ -1.88
CISHQ9NSE2 OR4A2P-201ENST00000527276 913 ntBASIC3.33□□□□□ -1.88
CISHQ9NSE2 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
CISHQ9NSE2 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.33□□□□□ -1.88
CISHQ9NSE2 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.33□□□□□ -1.88
CISHQ9NSE2 AC079880.2-201ENST00000603790 1213 ntBASIC3.33□□□□□ -1.88
CISHQ9NSE2 AC019131.2-201ENST00000609071 870 ntBASIC3.33□□□□□ -1.88
CISHQ9NSE2 C2orf27A-204ENST00000623058 969 ntBASIC3.33□□□□□ -1.88
CISHQ9NSE2 AC099506.2-201ENST00000623074 221 ntBASIC3.33□□□□□ -1.88
CISHQ9NSE2 MIR7153-201ENST00000637758 57 ntBASIC3.33□□□□□ -1.88
CISHQ9NSE2 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CISHQ9NSE2 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CISHQ9NSE2 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
CISHQ9NSE2 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
CISHQ9NSE2 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.32□□□□□ -1.88
CISHQ9NSE2 AC107081.3-201ENST00000612715 2034 ntBASIC3.32□□□□□ -1.88
CISHQ9NSE2 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CISHQ9NSE2 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CISHQ9NSE2 SNORD15B-201ENST00000384714 146 ntBASIC3.32□□□□□ -1.88
CISHQ9NSE2 AC110754.1-201ENST00000399740 601 ntBASIC3.32□□□□□ -1.88
CISHQ9NSE2 SMC4P1-201ENST00000414479 527 ntBASIC3.32□□□□□ -1.88
CISHQ9NSE2 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.32□□□□□ -1.88
CISHQ9NSE2 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.32□□□□□ -1.88
CISHQ9NSE2 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.32□□□□□ -1.88
CISHQ9NSE2 RPL23AP14-201ENST00000468281 468 ntBASIC3.32□□□□□ -1.88
CISHQ9NSE2 SEPT7P6-201ENST00000469999 1143 ntBASIC3.32□□□□□ -1.88
CISHQ9NSE2 AC068305.1-201ENST00000497406 726 ntBASIC3.32□□□□□ -1.88
CISHQ9NSE2 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.32□□□□□ -1.88
CISHQ9NSE2 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.32□□□□□ -1.88
CISHQ9NSE2 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.32□□□□□ -1.88
CISHQ9NSE2 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.32□□□□□ -1.88
CISHQ9NSE2 AC009101.1-201ENST00000568135 242 ntBASIC3.32□□□□□ -1.88
CISHQ9NSE2 MIR4644-201ENST00000579929 84 ntBASIC3.32□□□□□ -1.88
CISHQ9NSE2 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.32□□□□□ -1.88
CISHQ9NSE2 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.32□□□□□ -1.88
CISHQ9NSE2 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.32□□□□□ -1.88
CISHQ9NSE2 AC011492.1-201ENST00000600023 315 ntBASIC3.32□□□□□ -1.88
CISHQ9NSE2 AC009948.4-201ENST00000604692 675 ntBASIC3.32□□□□□ -1.88
CISHQ9NSE2 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.32□□□□□ -1.88
CISHQ9NSE2 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.32□□□□□ -1.88
CISHQ9NSE2 MIR622-201ENST00000638396 96 ntBASIC3.32□□□□□ -1.88
CISHQ9NSE2 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CISHQ9NSE2 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.32□□□□□ -1.88
CISHQ9NSE2 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CISHQ9NSE2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CISHQ9NSE2 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CISHQ9NSE2 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 AC004972.1-201ENST00000623934 2209 ntBASIC3.31□□□□□ -1.88
CISHQ9NSE2 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CISHQ9NSE2 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 RNU6-805P-201ENST00000365643 106 ntBASIC3.31□□□□□ -1.88
CISHQ9NSE2 SNORD67-201ENST00000390833 111 ntBASIC3.31□□□□□ -1.88
CISHQ9NSE2 AL034403.1-201ENST00000399414 885 ntBASIC3.31□□□□□ -1.88
CISHQ9NSE2 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 AC093698.1-201ENST00000423843 571 ntBASIC3.31□□□□□ -1.88
CISHQ9NSE2 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.31□□□□□ -1.88
CISHQ9NSE2 RPL23AP22-201ENST00000437556 453 ntBASIC3.31□□□□□ -1.88
CISHQ9NSE2 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 AC016696.1-201ENST00000446949 318 ntBASIC3.31□□□□□ -1.88
CISHQ9NSE2 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 AC006445.1-201ENST00000491925 405 ntBASIC3.31□□□□□ -1.88
CISHQ9NSE2 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 AGGF1P8-201ENST00000562979 1000 ntBASIC3.31□□□□□ -1.88
CISHQ9NSE2 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 AC005242.1-201ENST00000585658 438 ntBASIC3.31□□□□□ -1.88
CISHQ9NSE2 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 AC007620.3-201ENST00000608131 497 ntBASIC3.31□□□□□ -1.88
CISHQ9NSE2 AC084036.1-201ENST00000609190 508 ntBASIC3.31□□□□□ -1.88
CISHQ9NSE2 AC123768.4-201ENST00000616244 701 ntBASIC3.31□□□□□ -1.88
CISHQ9NSE2 MIR3651-201ENST00000630427 90 ntBASIC3.31□□□□□ -1.88
CISHQ9NSE2 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms