Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 ULK4P3-201ENST00000563895 440 ntBASIC8.11□□□□□ -1.11
RTN4Q9NQC3 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 RPL23AP87-202ENST00000573039 466 ntBASIC8.11□□□□□ -1.11
RTN4Q9NQC3 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 AC116312.1-201ENST00000606841 314 ntBASIC8.11□□□□□ -1.11
RTN4Q9NQC3 AL121612.2-201ENST00000612261 482 ntBASIC8.11□□□□□ -1.11
RTN4Q9NQC3 MIR6761-201ENST00000617899 72 ntBASIC8.11□□□□□ -1.11
RTN4Q9NQC3 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 SHQ1P1-201ENST00000437111 1544 ntBASIC8.11□□□□□ -1.11
RTN4Q9NQC3 MTND5P19-201ENST00000424872 1794 ntBASIC8.11□□□□□ -1.11
RTN4Q9NQC3 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 COG2-209ENST00000534989 2963 ntTSL 2 BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 RNA5SP218-201ENST00000363188 109 ntBASIC8.1□□□□□ -1.11
RTN4Q9NQC3 AL354890.1-201ENST00000413730 346 ntBASIC8.1□□□□□ -1.11
RTN4Q9NQC3 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 E2F6P2-201ENST00000420708 748 ntBASIC8.1□□□□□ -1.11
RTN4Q9NQC3 RPL27AP8-201ENST00000424277 446 ntBASIC8.1□□□□□ -1.11
RTN4Q9NQC3 UBE2V1P4-201ENST00000425374 344 ntBASIC8.1□□□□□ -1.11
RTN4Q9NQC3 DDX11L10-201ENST00000430178 571 ntBASIC8.1□□□□□ -1.11
RTN4Q9NQC3 AC073063.1-201ENST00000434352 607 ntBASIC8.1□□□□□ -1.11
RTN4Q9NQC3 BSNDP4-201ENST00000436076 388 ntBASIC8.1□□□□□ -1.11
RTN4Q9NQC3 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 RN7SL233P-201ENST00000469988 277 ntBASIC8.1□□□□□ -1.11
RTN4Q9NQC3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 RNU6-307P-201ENST00000516743 106 ntBASIC8.1□□□□□ -1.11
RTN4Q9NQC3 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 AC007136.1-201ENST00000589141 199 ntBASIC8.1□□□□□ -1.11
RTN4Q9NQC3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC8.1□□□□□ -1.11
RTN4Q9NQC3 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 AL669831.3-213ENST00000636676 183 ntBASIC8.1□□□□□ -1.11
RTN4Q9NQC3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC8.1□□□□□ -1.11
RTN4Q9NQC3 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
RTN4Q9NQC3 AC010266.2-201ENST00000564741 3255 ntBASIC8.09□□□□□ -1.11
RTN4Q9NQC3 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC8.09□□□□□ -1.11
RTN4Q9NQC3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RTN4Q9NQC3 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC8.09□□□□□ -1.11
RTN4Q9NQC3 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RTN4Q9NQC3 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC8.09□□□□□ -1.11
RTN4Q9NQC3 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC8.09□□□□□ -1.11
RTN4Q9NQC3 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
RTN4Q9NQC3 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
RTN4Q9NQC3 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RTN4Q9NQC3 RNU6-371P-201ENST00000364283 108 ntBASIC8.09□□□□□ -1.11
RTN4Q9NQC3 SNORA63C-201ENST00000364578 129 ntBASIC8.09□□□□□ -1.11
RTN4Q9NQC3 AL445189.1-201ENST00000405722 338 ntBASIC8.09□□□□□ -1.11
RTN4Q9NQC3 SNORA2C-201ENST00000408564 137 ntBASIC8.09□□□□□ -1.11
RTN4Q9NQC3 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC8.09□□□□□ -1.11
RTN4Q9NQC3 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC8.09□□□□□ -1.11
RTN4Q9NQC3 AC245884.2-201ENST00000426257 404 ntBASIC8.09□□□□□ -1.11
RTN4Q9NQC3 FABP7P2-201ENST00000429946 379 ntBASIC8.09□□□□□ -1.11
RTN4Q9NQC3 AL645568.3-201ENST00000433683 316 ntBASIC8.09□□□□□ -1.11
RTN4Q9NQC3 AC010285.1-201ENST00000470580 392 ntBASIC8.09□□□□□ -1.11
RTN4Q9NQC3 AC117503.1-201ENST00000472241 394 ntBASIC8.09□□□□□ -1.11
RTN4Q9NQC3 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC8.09□□□□□ -1.11
RTN4Q9NQC3 AC146944.3-201ENST00000509969 371 ntBASIC8.09□□□□□ -1.11
RTN4Q9NQC3 ODF1-202ENST00000518835 368 ntTSL 3 BASIC8.09□□□□□ -1.11
RTN4Q9NQC3 SNRPGP16-201ENST00000533275 226 ntBASIC8.09□□□□□ -1.11
RTN4Q9NQC3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC8.09□□□□□ -1.11
RTN4Q9NQC3 DCN-210ENST00000547568 823 ntTSL 3 BASIC8.09□□□□□ -1.11
RTN4Q9NQC3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC8.09□□□□□ -1.11
RTN4Q9NQC3 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC8.09□□□□□ -1.11
RTN4Q9NQC3 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC8.09□□□□□ -1.11
RTN4Q9NQC3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC8.09□□□□□ -1.11
RTN4Q9NQC3 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC8.09□□□□□ -1.11
RTN4Q9NQC3 AC008814.1-201ENST00000603797 406 ntBASIC8.09□□□□□ -1.11
RTN4Q9NQC3 AP002826.1-201ENST00000608835 315 ntBASIC8.09□□□□□ -1.11
RTN4Q9NQC3 uc_338.22-201ENST00000622722 187 ntBASIC8.09□□□□□ -1.11
RTN4Q9NQC3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC8.09□□□□□ -1.11
RTN4Q9NQC3 PGAM1P5-203ENST00000626376 313 ntTSL 5 BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms