Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.06□□□□□ -1.76
CCSER1Q9C0I3 AC007537.2-201ENST00000472093 511 ntBASIC4.06□□□□□ -1.76
CCSER1Q9C0I3 AC126121.1-201ENST00000482313 553 ntBASIC4.06□□□□□ -1.76
CCSER1Q9C0I3 SNX5P1-201ENST00000505757 1041 ntBASIC4.06□□□□□ -1.76
CCSER1Q9C0I3 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.06□□□□□ -1.76
CCSER1Q9C0I3 MTND2P7-201ENST00000521337 640 ntBASIC4.06□□□□□ -1.76
CCSER1Q9C0I3 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.06□□□□□ -1.76
CCSER1Q9C0I3 OR4C2P-201ENST00000530855 1064 ntBASIC4.06□□□□□ -1.76
CCSER1Q9C0I3 AC139103.1-201ENST00000534696 1030 ntBASIC4.06□□□□□ -1.76
CCSER1Q9C0I3 AC006077.1-201ENST00000604746 343 ntBASIC4.06□□□□□ -1.76
CCSER1Q9C0I3 AC112503.1-201ENST00000608436 391 ntBASIC4.06□□□□□ -1.76
CCSER1Q9C0I3 AC006133.1-201ENST00000617106 264 ntBASIC4.06□□□□□ -1.76
CCSER1Q9C0I3 AP003400.6-201ENST00000624698 740 ntBASIC4.06□□□□□ -1.76
CCSER1Q9C0I3 AC092608.3-201ENST00000625017 386 ntBASIC4.06□□□□□ -1.76
CCSER1Q9C0I3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.06□□□□□ -1.76
CCSER1Q9C0I3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.06□□□□□ -1.76
CCSER1Q9C0I3 AL163152.1-201ENST00000642001 374 ntBASIC4.06□□□□□ -1.76
CCSER1Q9C0I3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCSER1Q9C0I3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCSER1Q9C0I3 AC007656.2-201ENST00000624902 4547 ntBASIC4.06□□□□□ -1.76
CCSER1Q9C0I3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 RNU6-543P-201ENST00000362576 108 ntBASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 RNU1-85P-201ENST00000364127 164 ntBASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 RNU6-650P-201ENST00000365658 111 ntBASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 Z98941.1-201ENST00000407764 100 ntBASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 RAB9AP3-201ENST00000412737 573 ntBASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 RPS15AP40-201ENST00000419621 391 ntBASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 RAB9AP1-201ENST00000449393 573 ntBASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 ANP32BP2-201ENST00000454525 545 ntBASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 AC084357.1-201ENST00000473404 255 ntBASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 AC008885.2-201ENST00000509506 930 ntBASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 AC133963.2-201ENST00000513686 578 ntBASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 AGGF1P8-201ENST00000562979 1000 ntBASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 MIR1254-2-201ENST00000579553 63 ntBASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
CCSER1Q9C0I3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 AL122126.1-201ENST00000546905 1318 ntBASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 RNA5SP167-201ENST00000365461 116 ntBASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 PTMAP2-201ENST00000397627 327 ntBASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 ATP5A1P2-201ENST00000412323 255 ntBASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 AL121882.1-201ENST00000422893 417 ntBASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 PSMA2P3-201ENST00000429685 675 ntBASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 FABP5P3-201ENST00000437960 408 ntBASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 RPS29P31-201ENST00000446147 164 ntBASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 RNU7-170P-201ENST00000459303 61 ntBASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 RPL9P32-201ENST00000464118 620 ntBASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 RPL37P6-202ENST00000464216 403 ntBASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 ACTR3P3-201ENST00000480448 893 ntBASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 PTGES3P3-201ENST00000511479 482 ntBASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 USP9YP5-201ENST00000511770 630 ntBASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 OR8L1P-201ENST00000534005 955 ntBASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 CYP2C60P-201ENST00000566088 139 ntBASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 MIR4444-1-201ENST00000581696 74 ntBASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 MIR4444-2-201ENST00000584390 74 ntBASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 AC113194.1-201ENST00000606037 500 ntBASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 AC073569.3-201ENST00000619055 682 ntBASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 CR392039.5-201ENST00000623201 510 ntBASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 AC073592.7-201ENST00000623659 507 ntBASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 AL590396.2-201ENST00000636511 1041 ntBASIC4.04□□□□□ -1.76
CCSER1Q9C0I3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms