Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 MYL12AP1-201ENST00000518490 515 ntBASIC2.54□□□□□ -2
CSMD1Q96PZ7 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.54□□□□□ -2
CSMD1Q96PZ7 PRELID3BP8-201ENST00000604148 295 ntBASIC2.54□□□□□ -2
CSMD1Q96PZ7 AC074276.2-201ENST00000619891 348 ntBASIC2.54□□□□□ -2
CSMD1Q96PZ7 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC2.54□□□□□ -2
CSMD1Q96PZ7 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.53□□□□□ -2
CSMD1Q96PZ7 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC2.53□□□□□ -2
CSMD1Q96PZ7 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.53□□□□□ -2
CSMD1Q96PZ7 AC087190.4-201ENST00000574616 8334 ntBASIC2.53□□□□□ -2
CSMD1Q96PZ7 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
CSMD1Q96PZ7 AC112492.1-201ENST00000449607 712 ntBASIC2.53□□□□□ -2
CSMD1Q96PZ7 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC2.53□□□□□ -2
CSMD1Q96PZ7 uc_338.1-201ENST00000612113 180 ntBASIC2.53□□□□□ -2
CSMD1Q96PZ7 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CSMD1Q96PZ7 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
CSMD1Q96PZ7 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
CSMD1Q96PZ7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
CSMD1Q96PZ7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CSMD1Q96PZ7 OR5BR1P-201ENST00000524992 1330 ntBASIC2.53□□□□□ -2
CSMD1Q96PZ7 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CSMD1Q96PZ7 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC2.53□□□□□ -2
CSMD1Q96PZ7 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
CSMD1Q96PZ7 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC2.53□□□□□ -2
CSMD1Q96PZ7 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC2.53□□□□□ -2
CSMD1Q96PZ7 AC112653.1-201ENST00000443851 386 ntBASIC2.53□□□□□ -2
CSMD1Q96PZ7 SNRPGP5-201ENST00000456003 220 ntBASIC2.53□□□□□ -2
CSMD1Q96PZ7 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.53□□□□□ -2
CSMD1Q96PZ7 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.53□□□□□ -2
CSMD1Q96PZ7 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.53□□□□□ -2
CSMD1Q96PZ7 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.53□□□□□ -2
CSMD1Q96PZ7 AC009977.1-201ENST00000586015 570 ntBASIC2.53□□□□□ -2
CSMD1Q96PZ7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.53□□□□□ -2
CSMD1Q96PZ7 MIR4727-201ENST00000622232 55 ntBASIC2.53□□□□□ -2
CSMD1Q96PZ7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CSMD1Q96PZ7 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC2.53□□□□□ -2
CSMD1Q96PZ7 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC2.53□□□□□ -2.01
CSMD1Q96PZ7 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC2.53□□□□□ -2.01
CSMD1Q96PZ7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC2.53□□□□□ -2.01
CSMD1Q96PZ7 NPM1P38-201ENST00000403835 865 ntBASIC2.53□□□□□ -2.01
CSMD1Q96PZ7 UQCRHP3-201ENST00000451503 251 ntBASIC2.53□□□□□ -2.01
CSMD1Q96PZ7 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC2.53□□□□□ -2.01
CSMD1Q96PZ7 AC022795.1-201ENST00000473808 480 ntBASIC2.53□□□□□ -2.01
CSMD1Q96PZ7 METTL15P1-201ENST00000481421 1045 ntBASIC2.53□□□□□ -2.01
CSMD1Q96PZ7 RPL31P13-201ENST00000484151 370 ntBASIC2.53□□□□□ -2.01
CSMD1Q96PZ7 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
CSMD1Q96PZ7 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.53□□□□□ -2.01
CSMD1Q96PZ7 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.53□□□□□ -2.01
CSMD1Q96PZ7 AL365400.2-201ENST00000605604 902 ntBASIC2.53□□□□□ -2.01
CSMD1Q96PZ7 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 AC000123.3-201ENST00000624029 4975 ntBASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 RPS4XP7-201ENST00000406274 780 ntBASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 HSPE1P16-201ENST00000426640 348 ntBASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 AC026634.1-201ENST00000634369 198 ntBASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 AP002088.1-201ENST00000382740 395 ntBASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 AC012065.2-201ENST00000421295 375 ntBASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 RPS26P47-201ENST00000427219 348 ntBASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 RPS26P3-201ENST00000470205 348 ntBASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 RPS4XP22-201ENST00000480755 780 ntBASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 SYT14P1-201ENST00000481459 721 ntBASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 AC004057.1-201ENST00000485827 348 ntBASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 AL157817.1-201ENST00000614264 790 ntBASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 AC009237.17-201ENST00000618111 748 ntBASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 AC099506.2-201ENST00000623074 221 ntBASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 AL596275.2-204ENST00000641628 552 ntBASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 AL596275.2-206ENST00000641957 626 ntBASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CSMD1Q96PZ7 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 AC146507.2-201ENST00000460608 476 ntBASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 HNRNPKP5-201ENST00000515300 253 ntBASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 MIR4738-201ENST00000579134 87 ntBASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 MIR6817-201ENST00000615588 66 ntBASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 NSRP1P1-201ENST00000444067 1693 ntBASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 RNA5SP508-201ENST00000411327 119 ntBASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 RPL37P4-201ENST00000448908 268 ntBASIC2.51□□□□□ -2.01
CSMD1Q96PZ7 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms