Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AC234782.4-201ENST00000417646 1048 ntBASIC9.56□□□□□ -0.88
TRIM41Q8WV44 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC9.56□□□□□ -0.88
TRIM41Q8WV44 HSPE1P28-201ENST00000443139 211 ntBASIC9.56□□□□□ -0.88
TRIM41Q8WV44 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC9.56□□□□□ -0.88
TRIM41Q8WV44 snoU13.20-201ENST00000459180 104 ntBASIC9.56□□□□□ -0.88
TRIM41Q8WV44 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC9.56□□□□□ -0.88
TRIM41Q8WV44 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
TRIM41Q8WV44 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC9.56□□□□□ -0.88
TRIM41Q8WV44 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC9.56□□□□□ -0.88
TRIM41Q8WV44 NRBF2P4-201ENST00000520874 850 ntBASIC9.56□□□□□ -0.88
TRIM41Q8WV44 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC9.56□□□□□ -0.88
TRIM41Q8WV44 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC9.56□□□□□ -0.88
TRIM41Q8WV44 AL133481.2-203ENST00000607558 139 ntBASIC9.56□□□□□ -0.88
TRIM41Q8WV44 AP001521.1-201ENST00000609150 300 ntBASIC9.56□□□□□ -0.88
TRIM41Q8WV44 AL354950.2-201ENST00000617939 290 ntBASIC9.56□□□□□ -0.88
TRIM41Q8WV44 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC9.56□□□□□ -0.88
TRIM41Q8WV44 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TRIM41Q8WV44 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
TRIM41Q8WV44 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TRIM41Q8WV44 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC9.56□□□□□ -0.88
TRIM41Q8WV44 AP001350.1-201ENST00000601906 1524 ntBASIC9.56□□□□□ -0.88
TRIM41Q8WV44 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 AP000547.3-204ENST00000588548 2523 ntBASIC9.55□□□□□ -0.88
TRIM41Q8WV44 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 RNA5SP123-201ENST00000363244 119 ntBASIC9.55□□□□□ -0.88
TRIM41Q8WV44 RNU6-115P-201ENST00000364310 107 ntBASIC9.55□□□□□ -0.88
TRIM41Q8WV44 Y_RNA.452-201ENST00000384202 108 ntBASIC9.55□□□□□ -0.88
TRIM41Q8WV44 MIR506-201ENST00000384998 124 ntBASIC9.55□□□□□ -0.88
TRIM41Q8WV44 GAPDHP42-201ENST00000406848 981 ntBASIC9.55□□□□□ -0.88
TRIM41Q8WV44 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 AL935212.3-201ENST00000450729 284 ntBASIC9.55□□□□□ -0.88
TRIM41Q8WV44 AL389915.2-201ENST00000454576 441 ntBASIC9.55□□□□□ -0.88
TRIM41Q8WV44 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 AC002075.1-201ENST00000457396 676 ntBASIC9.55□□□□□ -0.88
TRIM41Q8WV44 RPSAP51-201ENST00000497462 645 ntBASIC9.55□□□□□ -0.88
TRIM41Q8WV44 KLHL2P1-201ENST00000508691 521 ntBASIC9.55□□□□□ -0.88
TRIM41Q8WV44 Y_RNA.718-201ENST00000517110 102 ntBASIC9.55□□□□□ -0.88
TRIM41Q8WV44 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 MRPS21P7-201ENST00000566937 238 ntBASIC9.55□□□□□ -0.88
TRIM41Q8WV44 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 OR52H1-202ENST00000641796 1061 ntBASIC9.55□□□□□ -0.88
TRIM41Q8WV44 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 PWAR1-201ENST00000624188 2414 ntBASIC9.55□□□□□ -0.88
TRIM41Q8WV44 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TRIM41Q8WV44 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
TRIM41Q8WV44 MIR568-201ENST00000385036 95 ntBASIC9.54□□□□□ -0.88
TRIM41Q8WV44 DUTP6-201ENST00000425573 462 ntBASIC9.54□□□□□ -0.88
TRIM41Q8WV44 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC9.54□□□□□ -0.88
TRIM41Q8WV44 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC9.54□□□□□ -0.88
TRIM41Q8WV44 RPS7P5-201ENST00000441482 581 ntBASIC9.54□□□□□ -0.88
TRIM41Q8WV44 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC9.54□□□□□ -0.88
TRIM41Q8WV44 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC9.54□□□□□ -0.88
TRIM41Q8WV44 RPL12P39-201ENST00000455456 496 ntBASIC9.54□□□□□ -0.88
TRIM41Q8WV44 AC233702.1-201ENST00000482905 502 ntBASIC9.54□□□□□ -0.88
TRIM41Q8WV44 RAD51AP1P1-201ENST00000484195 1001 ntBASIC9.54□□□□□ -0.88
TRIM41Q8WV44 AC017037.2-201ENST00000513850 890 ntBASIC9.54□□□□□ -0.88
TRIM41Q8WV44 AC022616.6-201ENST00000520479 119 ntBASIC9.54□□□□□ -0.88
TRIM41Q8WV44 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC9.54□□□□□ -0.88
TRIM41Q8WV44 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC9.54□□□□□ -0.88
TRIM41Q8WV44 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC9.54□□□□□ -0.88
TRIM41Q8WV44 ACTR3BP1-201ENST00000605584 1247 ntBASIC9.54□□□□□ -0.88
TRIM41Q8WV44 ERCC6-202ENST00000374127 1782 ntBASIC9.54□□□□□ -0.88
TRIM41Q8WV44 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
TRIM41Q8WV44 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC9.54□□□□□ -0.88
TRIM41Q8WV44 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TRIM41Q8WV44 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC9.54□□□□□ -0.88
TRIM41Q8WV44 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
TRIM41Q8WV44 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC9.53□□□□□ -0.88
TRIM41Q8WV44 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC9.53□□□□□ -0.88
TRIM41Q8WV44 OFD1P5Y-201ENST00000447585 2590 ntBASIC9.53□□□□□ -0.88
TRIM41Q8WV44 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC9.53□□□□□ -0.88
TRIM41Q8WV44 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC9.53□□□□□ -0.88
TRIM41Q8WV44 RNA5SP87-201ENST00000384155 118 ntBASIC9.53□□□□□ -0.88
TRIM41Q8WV44 GLULP6-201ENST00000399502 913 ntBASIC9.53□□□□□ -0.88
TRIM41Q8WV44 AL451054.2-201ENST00000420896 202 ntBASIC9.53□□□□□ -0.88
TRIM41Q8WV44 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC9.53□□□□□ -0.88
TRIM41Q8WV44 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC9.53□□□□□ -0.88
TRIM41Q8WV44 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC9.53□□□□□ -0.88
TRIM41Q8WV44 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC9.53□□□□□ -0.88
TRIM41Q8WV44 AC019185.1-201ENST00000442718 389 ntBASIC9.53□□□□□ -0.88
TRIM41Q8WV44 RPS27AP15-201ENST00000447672 466 ntBASIC9.53□□□□□ -0.88
TRIM41Q8WV44 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC9.53□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms