Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RPL23AP73-201ENST00000492507 471 ntBASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 MTCO2P32-201ENST00000514865 403 ntBASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 SNORA70.18-201ENST00000516696 98 ntBASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 RNU6-1073P-201ENST00000517182 106 ntBASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 AP006245.1-201ENST00000522549 120 ntBASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 MIR5685-201ENST00000579080 79 ntBASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 MIR5187-201ENST00000583479 76 ntBASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 BNIP3P38-201ENST00000601117 544 ntBASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 AC007823.1-201ENST00000569932 1566 ntBASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 AC068647.1-201ENST00000489539 2265 ntBASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLHC1Q8NHS4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLHC1Q8NHS4 XPOTP1-201ENST00000443317 2398 ntBASIC3.4□□□□□ -1.86
CLHC1Q8NHS4 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CLHC1Q8NHS4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
CLHC1Q8NHS4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CLHC1Q8NHS4 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 MIR1250-201ENST00000408098 113 ntBASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 RNU2-6P-201ENST00000411404 190 ntBASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 DBIP2-201ENST00000419076 262 ntBASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 RPL17P36-201ENST00000420302 549 ntBASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 ACTG1P13-201ENST00000486987 1043 ntBASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 MTND4LP22-201ENST00000508209 276 ntBASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 PCBP2P3-201ENST00000509726 843 ntBASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 AC026402.1-201ENST00000513642 170 ntBASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 AC008562.1-201ENST00000521763 330 ntBASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 AP001207.1-201ENST00000524051 481 ntBASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 AC011492.1-201ENST00000600023 315 ntBASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 AC110792.4-201ENST00000609843 298 ntBASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 AC022149.2-201ENST00000621061 203 ntBASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 AL357559.1-201ENST00000622228 274 ntBASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLHC1Q8NHS4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 U8.11-201ENST00000384699 133 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 U8.12-201ENST00000384701 133 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 AL590704.1-201ENST00000402856 794 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 MTATP6P31-201ENST00000406985 692 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 U3.39-201ENST00000408569 239 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 TCEA1P4-201ENST00000415066 844 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 MTCYBP24-201ENST00000420387 1106 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 AC005517.2-201ENST00000424673 553 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 TRIAP1P1-201ENST00000427062 225 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 AC104308.1-201ENST00000454621 333 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 U8.18-201ENST00000459285 133 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 AC010468.1-201ENST00000461022 817 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 AC103987.1-201ENST00000473394 348 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 MTCO3P35-201ENST00000485582 781 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 UBE2NP1-201ENST00000545592 458 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 AC090751.1-201ENST00000566966 267 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 AC107982.3-201ENST00000584957 985 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 AL365503.1-201ENST00000605247 905 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 AC090912.3-201ENST00000609775 533 ntBASIC3.39□□□□□ -1.87
CLHC1Q8NHS4 RMST_8.1-201ENST00000610287 165 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms