Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 MIR8058-201ENST00000615737 89 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 AL022401.1-201ENST00000619498 108 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 AC091925.2-201ENST00000625059 256 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 MTCO1P23-201ENST00000415223 1526 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 SNORA56-201ENST00000383966 129 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 RNU6-1074P-201ENST00000383995 104 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 RNU6-398P-201ENST00000384143 109 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 MTCO1P56-201ENST00000401674 224 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 MTHFD2P2-201ENST00000407725 247 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 RPS23P10-201ENST00000416185 486 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 OR4K6P-201ENST00000416478 897 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AC069213.2-201ENST00000420238 366 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 GLRXP1-201ENST00000423261 334 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 NDUFA12P1-201ENST00000455914 406 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 MTCO3P35-201ENST00000485582 781 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 MLLT10P2-201ENST00000506434 249 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 RN7SKP276-201ENST00000516242 268 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AP000619.3-201ENST00000535634 1127 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AC133555.2-201ENST00000550213 292 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 RN7SL690P-201ENST00000582087 240 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AC012669.1-201ENST00000603209 283 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AC055876.5-201ENST00000605667 259 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AC138915.3-201ENST00000562908 1389 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 AL365440.1-201ENST00000436135 2167 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 NCLP2-201ENST00000416078 1462 ntBASIC3.86□□□□□ -1.79
C11orf88Q6PI97 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
C11orf88Q6PI97 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
C11orf88Q6PI97 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
C11orf88Q6PI97 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
C11orf88Q6PI97 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
C11orf88Q6PI97 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
C11orf88Q6PI97 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
C11orf88Q6PI97 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.85□□□□□ -1.79
C11orf88Q6PI97 AP005901.5-201ENST00000545779 1796 ntBASIC3.85□□□□□ -1.79
C11orf88Q6PI97 OR4K15-201ENST00000305051 1216 ntBASIC3.85□□□□□ -1.79
C11orf88Q6PI97 U1.1-201ENST00000384101 164 ntBASIC3.85□□□□□ -1.79
C11orf88Q6PI97 RNU6-1257P-201ENST00000384625 110 ntBASIC3.85□□□□□ -1.79
C11orf88Q6PI97 MIR141-201ENST00000384975 95 ntBASIC3.85□□□□□ -1.79
C11orf88Q6PI97 U3.29-201ENST00000391296 212 ntBASIC3.85□□□□□ -1.79
C11orf88Q6PI97 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.85□□□□□ -1.79
C11orf88Q6PI97 JKAMPP1-201ENST00000413804 919 ntBASIC3.85□□□□□ -1.79
C11orf88Q6PI97 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
C11orf88Q6PI97 CNOT7P1-201ENST00000429006 852 ntBASIC3.85□□□□□ -1.79
C11orf88Q6PI97 PRELID3BP10-201ENST00000431957 584 ntBASIC3.85□□□□□ -1.79
C11orf88Q6PI97 GTF2IP3-201ENST00000433887 494 ntBASIC3.85□□□□□ -1.79
C11orf88Q6PI97 SNORA71B-202ENST00000439232 272 ntBASIC3.85□□□□□ -1.79
C11orf88Q6PI97 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.85□□□□□ -1.79
C11orf88Q6PI97 RRM2P4-201ENST00000441721 562 ntBASIC3.85□□□□□ -1.79
C11orf88Q6PI97 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.85□□□□□ -1.79
C11orf88Q6PI97 AC010326.1-201ENST00000462726 602 ntBASIC3.85□□□□□ -1.79
C11orf88Q6PI97 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.85□□□□□ -1.79
C11orf88Q6PI97 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
C11orf88Q6PI97 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms