Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 BX842559.1-201ENST00000419615 532 ntBASIC2.68□□□□□ -1.98
LSM3P62310 SETP5-201ENST00000437270 562 ntBASIC2.68□□□□□ -1.98
LSM3P62310 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.68□□□□□ -1.98
LSM3P62310 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.68□□□□□ -1.98
LSM3P62310 AL592437.1-201ENST00000443781 492 ntBASIC2.68□□□□□ -1.98
LSM3P62310 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC2.68□□□□□ -1.98
LSM3P62310 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.68□□□□□ -1.98
LSM3P62310 HMGB3P30-201ENST00000457863 606 ntBASIC2.68□□□□□ -1.98
LSM3P62310 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC2.68□□□□□ -1.98
LSM3P62310 RPS29P22-201ENST00000472363 168 ntBASIC2.68□□□□□ -1.98
LSM3P62310 AC104619.4-201ENST00000510773 249 ntBASIC2.68□□□□□ -1.98
LSM3P62310 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.68□□□□□ -1.98
LSM3P62310 RGS5-218ENST00000526176 574 ntTSL 4 BASIC2.68□□□□□ -1.98
LSM3P62310 MIR4286-201ENST00000580651 93 ntBASIC2.68□□□□□ -1.98
LSM3P62310 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.68□□□□□ -1.98
LSM3P62310 AC015849.2-201ENST00000605738 409 ntBASIC2.68□□□□□ -1.98
LSM3P62310 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.68□□□□□ -1.98
LSM3P62310 AC004832.5-201ENST00000608677 401 ntBASIC2.68□□□□□ -1.98
LSM3P62310 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
LSM3P62310 AL392088.2-201ENST00000637607 285 ntBASIC2.68□□□□□ -1.98
LSM3P62310 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
LSM3P62310 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LSM3P62310 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.68□□□□□ -1.98
LSM3P62310 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.68□□□□□ -1.98
LSM3P62310 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.67□□□□□ -1.98
LSM3P62310 AC006378.2-201ENST00000623178 2476 ntBASIC2.67□□□□□ -1.98
LSM3P62310 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LSM3P62310 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.67□□□□□ -1.98
LSM3P62310 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.67□□□□□ -1.98
LSM3P62310 MTND2P16-201ENST00000419987 799 ntBASIC2.67□□□□□ -1.98
LSM3P62310 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.67□□□□□ -1.98
LSM3P62310 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC2.67□□□□□ -1.98
LSM3P62310 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.67□□□□□ -1.98
LSM3P62310 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC2.67□□□□□ -1.98
LSM3P62310 RPL21P110-201ENST00000433345 446 ntBASIC2.67□□□□□ -1.98
LSM3P62310 VDAC1P3-201ENST00000434069 851 ntBASIC2.67□□□□□ -1.98
LSM3P62310 RPL36AP6-201ENST00000435770 321 ntBASIC2.67□□□□□ -1.98
LSM3P62310 RPS7P5-201ENST00000441482 581 ntBASIC2.67□□□□□ -1.98
LSM3P62310 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.67□□□□□ -1.98
LSM3P62310 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LSM3P62310 OR7L1P-201ENST00000456181 380 ntBASIC2.67□□□□□ -1.98
LSM3P62310 AC008155.2-201ENST00000464337 397 ntBASIC2.67□□□□□ -1.98
LSM3P62310 RN7SL297P-201ENST00000483161 293 ntBASIC2.67□□□□□ -1.98
LSM3P62310 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.67□□□□□ -1.98
LSM3P62310 TRMT10BP1-201ENST00000519377 943 ntBASIC2.67□□□□□ -1.98
LSM3P62310 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC2.67□□□□□ -1.98
LSM3P62310 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.67□□□□□ -1.98
LSM3P62310 GTF2IP22-201ENST00000554443 182 ntBASIC2.67□□□□□ -1.98
LSM3P62310 OR4U1P-201ENST00000554958 912 ntBASIC2.67□□□□□ -1.98
LSM3P62310 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LSM3P62310 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.67□□□□□ -1.98
LSM3P62310 MIR4284-201ENST00000578924 81 ntBASIC2.67□□□□□ -1.98
LSM3P62310 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LSM3P62310 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.67□□□□□ -1.98
LSM3P62310 AP000787.2-201ENST00000604432 568 ntBASIC2.67□□□□□ -1.98
LSM3P62310 AC002076.2-201ENST00000617362 122 ntBASIC2.67□□□□□ -1.98
LSM3P62310 AC006065.5-201ENST00000623427 349 ntBASIC2.67□□□□□ -1.98
LSM3P62310 AC009039.2-201ENST00000624524 529 ntBASIC2.67□□□□□ -1.98
LSM3P62310 FRG1DP-201ENST00000635586 771 ntBASIC2.67□□□□□ -1.98
LSM3P62310 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LSM3P62310 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LSM3P62310 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LSM3P62310 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LSM3P62310 AC092447.7-201ENST00000422212 1621 ntBASIC2.67□□□□□ -1.98
LSM3P62310 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LSM3P62310 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LSM3P62310 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LSM3P62310 RNU1-32P-201ENST00000363937 159 ntBASIC2.66□□□□□ -1.98
LSM3P62310 SNORA58B-201ENST00000364259 136 ntBASIC2.66□□□□□ -1.98
LSM3P62310 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.66□□□□□ -1.98
LSM3P62310 AC240504.1-201ENST00000395709 845 ntBASIC2.66□□□□□ -1.98
LSM3P62310 HSPE1P26-201ENST00000405341 275 ntBASIC2.66□□□□□ -1.98
LSM3P62310 XKRYP4-201ENST00000414395 483 ntBASIC2.66□□□□□ -1.98
LSM3P62310 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.66□□□□□ -1.98
LSM3P62310 AC245028.1-201ENST00000423259 256 ntBASIC2.66□□□□□ -1.98
LSM3P62310 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.66□□□□□ -1.98
LSM3P62310 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.66□□□□□ -1.98
LSM3P62310 XKRYP5-201ENST00000449659 483 ntBASIC2.66□□□□□ -1.98
LSM3P62310 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC2.66□□□□□ -1.98
LSM3P62310 RPL37P6-202ENST00000464216 403 ntBASIC2.66□□□□□ -1.98
LSM3P62310 AC008571.1-201ENST00000467232 300 ntBASIC2.66□□□□□ -1.98
LSM3P62310 RN7SL132P-201ENST00000478131 296 ntBASIC2.66□□□□□ -1.98
LSM3P62310 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC2.66□□□□□ -1.98
LSM3P62310 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC2.66□□□□□ -1.98
LSM3P62310 OR4A45P-201ENST00000529954 901 ntBASIC2.66□□□□□ -1.98
LSM3P62310 AP000857.1-201ENST00000532151 543 ntBASIC2.66□□□□□ -1.98
LSM3P62310 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.66□□□□□ -1.98
LSM3P62310 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC2.66□□□□□ -1.98
LSM3P62310 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.66□□□□□ -1.98
LSM3P62310 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.66□□□□□ -1.98
LSM3P62310 AC091488.1-201ENST00000604239 660 ntBASIC2.66□□□□□ -1.98
LSM3P62310 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.66□□□□□ -1.98
LSM3P62310 AC105227.2-201ENST00000615075 605 ntBASIC2.66□□□□□ -1.98
LSM3P62310 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC2.66□□□□□ -1.98
LSM3P62310 AC116563.2-201ENST00000624751 535 ntBASIC2.66□□□□□ -1.98
LSM3P62310 MIR6830-201ENST00000636015 70 ntBASIC2.66□□□□□ -1.98
LSM3P62310 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
LSM3P62310 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
LSM3P62310 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.65□□□□□ -1.98
LSM3P62310 API5P2-201ENST00000397055 1498 ntBASIC2.65□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms