Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC010424.1-201ENST00000506336 297 ntBASIC4.16□□□□□ -1.74
CDH12P55289 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH12P55289 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
CDH12P55289 Y_RNA.695-201ENST00000516715 107 ntBASIC4.16□□□□□ -1.74
CDH12P55289 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.16□□□□□ -1.74
CDH12P55289 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.16□□□□□ -1.74
CDH12P55289 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.16□□□□□ -1.74
CDH12P55289 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH12P55289 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH12P55289 AC063949.1-201ENST00000552900 865 ntBASIC4.16□□□□□ -1.74
CDH12P55289 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH12P55289 PSMB7P1-201ENST00000556349 514 ntBASIC4.16□□□□□ -1.74
CDH12P55289 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH12P55289 UBE2FP2-201ENST00000566646 462 ntBASIC4.16□□□□□ -1.74
CDH12P55289 OR1F2P-201ENST00000570470 933 ntBASIC4.16□□□□□ -1.74
CDH12P55289 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH12P55289 MIR4737-201ENST00000583979 81 ntBASIC4.16□□□□□ -1.74
CDH12P55289 KPNA2P3-201ENST00000584190 848 ntBASIC4.16□□□□□ -1.74
CDH12P55289 NF1P5-201ENST00000588287 448 ntBASIC4.16□□□□□ -1.74
CDH12P55289 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH12P55289 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH12P55289 AC073544.2-201ENST00000601155 540 ntBASIC4.16□□□□□ -1.74
CDH12P55289 AL160290.3-201ENST00000604869 165 ntBASIC4.16□□□□□ -1.74
CDH12P55289 AC005084.1-201ENST00000605160 304 ntBASIC4.16□□□□□ -1.74
CDH12P55289 AC106028.5-201ENST00000610332 395 ntBASIC4.16□□□□□ -1.74
CDH12P55289 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.16□□□□□ -1.74
CDH12P55289 AL356266.1-201ENST00000623311 483 ntBASIC4.16□□□□□ -1.74
CDH12P55289 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH12P55289 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.16□□□□□ -1.74
CDH12P55289 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH12P55289 SDAD1P1-202ENST00000524156 2051 ntBASIC4.16□□□□□ -1.74
CDH12P55289 ZNF137P-201ENST00000456718 1920 ntBASIC4.16□□□□□ -1.74
CDH12P55289 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.16□□□□□ -1.74
CDH12P55289 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDH12P55289 A2MP1-204ENST00000566278 4130 ntBASIC4.16□□□□□ -1.74
CDH12P55289 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDH12P55289 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDH12P55289 KARSP3-201ENST00000571212 1504 ntBASIC4.16□□□□□ -1.74
CDH12P55289 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CDH12P55289 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CDH12P55289 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CDH12P55289 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CDH12P55289 MTCO1P14-201ENST00000441695 1559 ntBASIC4.15□□□□□ -1.74
CDH12P55289 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
CDH12P55289 AC010928.1-201ENST00000592477 1447 ntBASIC4.15□□□□□ -1.74
CDH12P55289 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
CDH12P55289 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CDH12P55289 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDH12P55289 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDH12P55289 RNU1-15P-201ENST00000353977 144 ntBASIC4.15□□□□□ -1.75
CDH12P55289 RNU6-984P-201ENST00000363236 109 ntBASIC4.15□□□□□ -1.75
CDH12P55289 SNORA71.2-201ENST00000364941 134 ntBASIC4.15□□□□□ -1.75
CDH12P55289 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CDH12P55289 MIR105-2-201ENST00000385083 81 ntBASIC4.15□□□□□ -1.75
CDH12P55289 RPS24P12-201ENST00000402084 394 ntBASIC4.15□□□□□ -1.75
CDH12P55289 RPL31P52-201ENST00000407532 367 ntBASIC4.15□□□□□ -1.75
CDH12P55289 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH12P55289 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH12P55289 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.15□□□□□ -1.75
CDH12P55289 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH12P55289 RAD23BP1-201ENST00000421404 1227 ntBASIC4.15□□□□□ -1.75
CDH12P55289 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH12P55289 NIPA2P1-201ENST00000426223 976 ntBASIC4.15□□□□□ -1.75
CDH12P55289 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH12P55289 MED14P1-201ENST00000430517 648 ntBASIC4.15□□□□□ -1.75
CDH12P55289 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH12P55289 LARP1BP3-201ENST00000437229 869 ntBASIC4.15□□□□□ -1.75
CDH12P55289 MTND1P30-201ENST00000441241 901 ntBASIC4.15□□□□□ -1.75
CDH12P55289 TRIM60P18-201ENST00000441518 828 ntBASIC4.15□□□□□ -1.75
CDH12P55289 GEMIN8P3-201ENST00000445417 720 ntBASIC4.15□□□□□ -1.75
CDH12P55289 AC239809.1-201ENST00000450470 217 ntBASIC4.15□□□□□ -1.75
CDH12P55289 HIGD1AP8-201ENST00000453927 274 ntBASIC4.15□□□□□ -1.75
CDH12P55289 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH12P55289 RPS3AP41-201ENST00000462701 778 ntBASIC4.15□□□□□ -1.75
CDH12P55289 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH12P55289 MTND4P2-201ENST00000507767 1203 ntBASIC4.15□□□□□ -1.75
CDH12P55289 NDUFB5P1-201ENST00000508134 564 ntBASIC4.15□□□□□ -1.75
CDH12P55289 MTCO3P7-201ENST00000510008 774 ntBASIC4.15□□□□□ -1.75
CDH12P55289 AC091965.2-201ENST00000512324 613 ntBASIC4.15□□□□□ -1.75
CDH12P55289 MTCYBP43-201ENST00000513621 740 ntBASIC4.15□□□□□ -1.75
CDH12P55289 AC015795.1-201ENST00000513669 327 ntBASIC4.15□□□□□ -1.75
CDH12P55289 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.15□□□□□ -1.75
CDH12P55289 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH12P55289 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH12P55289 AC008802.1-201ENST00000519121 791 ntBASIC4.15□□□□□ -1.75
CDH12P55289 DEFB131D-201ENST00000526803 184 ntBASIC4.15□□□□□ -1.75
CDH12P55289 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH12P55289 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH12P55289 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CDH12P55289 CYCSP2-201ENST00000558168 301 ntBASIC4.15□□□□□ -1.75
CDH12P55289 SULT1C2P1-202ENST00000562418 459 ntBASIC4.15□□□□□ -1.75
CDH12P55289 AC012414.6-201ENST00000568241 401 ntBASIC4.15□□□□□ -1.75
CDH12P55289 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.15□□□□□ -1.75
CDH12P55289 MIR3934-201ENST00000579806 107 ntBASIC4.15□□□□□ -1.75
CDH12P55289 AC008507.1-201ENST00000587506 734 ntBASIC4.15□□□□□ -1.75
CDH12P55289 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH12P55289 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH12P55289 U73023.1-201ENST00000603134 700 ntBASIC4.15□□□□□ -1.75
CDH12P55289 BPIFA4P-203ENST00000603168 689 ntBASIC4.15□□□□□ -1.75
CDH12P55289 AC083899.3-201ENST00000603413 594 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms