Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 AC093010.3-201ENST00000570269 15214 ntBASIC2.85□□□□□ -1.95
POLR2JP52435 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
POLR2JP52435 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
POLR2JP52435 AC119744.1-201ENST00000454746 1715 ntBASIC2.85□□□□□ -1.95
POLR2JP52435 SYT14P1-202ENST00000600441 1448 ntBASIC2.85□□□□□ -1.95
POLR2JP52435 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC2.84□□□□□ -1.95
POLR2JP52435 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
POLR2JP52435 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.84□□□□□ -1.95
POLR2JP52435 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
POLR2JP52435 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
POLR2JP52435 MIR22-201ENST00000362190 85 ntBASIC2.84□□□□□ -1.95
POLR2JP52435 MIR181B1-201ENST00000385240 110 ntBASIC2.84□□□□□ -1.95
POLR2JP52435 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.84□□□□□ -1.95
POLR2JP52435 AL353692.2-201ENST00000407054 335 ntBASIC2.84□□□□□ -1.95
POLR2JP52435 U3.42-201ENST00000408746 214 ntBASIC2.84□□□□□ -1.95
POLR2JP52435 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.84□□□□□ -1.95
POLR2JP52435 AL390023.1-201ENST00000428836 262 ntBASIC2.84□□□□□ -1.95
POLR2JP52435 AC097713.2-201ENST00000430199 356 ntBASIC2.84□□□□□ -1.95
POLR2JP52435 RPL23AP69-201ENST00000431134 458 ntBASIC2.84□□□□□ -1.95
POLR2JP52435 RPS29P6-201ENST00000438196 145 ntBASIC2.84□□□□□ -1.95
POLR2JP52435 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.84□□□□□ -1.95
POLR2JP52435 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
POLR2JP52435 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.84□□□□□ -1.95
POLR2JP52435 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.84□□□□□ -1.95
POLR2JP52435 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.84□□□□□ -1.95
POLR2JP52435 OR5G4P-201ENST00000525251 760 ntBASIC2.84□□□□□ -1.95
POLR2JP52435 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.84□□□□□ -1.95
POLR2JP52435 SNORD39.2-201ENST00000579995 76 ntBASIC2.84□□□□□ -1.95
POLR2JP52435 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.84□□□□□ -1.95
POLR2JP52435 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.84□□□□□ -1.95
POLR2JP52435 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.84□□□□□ -1.95
POLR2JP52435 SNORA51-201ENST00000606420 132 ntBASIC2.84□□□□□ -1.95
POLR2JP52435 Z99129.2-201ENST00000619967 314 ntBASIC2.84□□□□□ -1.95
POLR2JP52435 AC020763.5-201ENST00000623298 430 ntBASIC2.84□□□□□ -1.95
POLR2JP52435 SNORA50A-202ENST00000629536 136 ntBASIC2.84□□□□□ -1.95
POLR2JP52435 AC139713.2-210ENST00000641741 992 ntBASIC2.84□□□□□ -1.95
POLR2JP52435 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.84□□□□□ -1.95
POLR2JP52435 AP001148.1-201ENST00000624124 2359 ntBASIC2.84□□□□□ -1.95
POLR2JP52435 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
POLR2JP52435 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.96
POLR2JP52435 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
POLR2JP52435 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
POLR2JP52435 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
POLR2JP52435 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.83□□□□□ -1.96
POLR2JP52435 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.83□□□□□ -1.96
POLR2JP52435 RPL9P7-201ENST00000330965 580 ntBASIC2.83□□□□□ -1.96
POLR2JP52435 RNU1-35P-201ENST00000362782 153 ntBASIC2.83□□□□□ -1.96
POLR2JP52435 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
POLR2JP52435 RNU6-146P-201ENST00000384602 108 ntBASIC2.83□□□□□ -1.96
POLR2JP52435 RNA5SP344-201ENST00000411081 104 ntBASIC2.83□□□□□ -1.96
POLR2JP52435 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.83□□□□□ -1.96
POLR2JP52435 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.83□□□□□ -1.96
POLR2JP52435 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.83□□□□□ -1.96
POLR2JP52435 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.83□□□□□ -1.96
POLR2JP52435 AC093151.1-201ENST00000427711 313 ntBASIC2.83□□□□□ -1.96
POLR2JP52435 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC2.83□□□□□ -1.96
POLR2JP52435 AL159987.2-201ENST00000432754 307 ntBASIC2.83□□□□□ -1.96
POLR2JP52435 OR2B8P-201ENST00000432841 938 ntBASIC2.83□□□□□ -1.96
POLR2JP52435 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.83□□□□□ -1.96
POLR2JP52435 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.83□□□□□ -1.96
POLR2JP52435 SNRPGP3-201ENST00000469405 227 ntBASIC2.83□□□□□ -1.96
POLR2JP52435 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.83□□□□□ -1.96
POLR2JP52435 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.83□□□□□ -1.96
POLR2JP52435 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.83□□□□□ -1.96
POLR2JP52435 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
POLR2JP52435 AC004943.3-201ENST00000624116 600 ntBASIC2.83□□□□□ -1.96
POLR2JP52435 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC2.83□□□□□ -1.96
POLR2JP52435 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
POLR2JP52435 AC138915.3-201ENST00000562908 1389 ntBASIC2.83□□□□□ -1.96
POLR2JP52435 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
POLR2JP52435 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
POLR2JP52435 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
POLR2JP52435 AC005183.1-201ENST00000603687 1979 ntBASIC2.82□□□□□ -1.96
POLR2JP52435 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
POLR2JP52435 PTMAP2-201ENST00000397627 327 ntBASIC2.82□□□□□ -1.96
POLR2JP52435 SNORD88.1-201ENST00000408684 91 ntBASIC2.82□□□□□ -1.96
POLR2JP52435 RPL37P1-201ENST00000432310 284 ntBASIC2.82□□□□□ -1.96
POLR2JP52435 VDAC1P3-201ENST00000434069 851 ntBASIC2.82□□□□□ -1.96
POLR2JP52435 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
POLR2JP52435 ELOCP10-201ENST00000440624 327 ntBASIC2.82□□□□□ -1.96
POLR2JP52435 MTND6P32-201ENST00000457611 483 ntBASIC2.82□□□□□ -1.96
POLR2JP52435 SOD1P3-201ENST00000518682 454 ntBASIC2.82□□□□□ -1.96
POLR2JP52435 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.82□□□□□ -1.96
POLR2JP52435 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.82□□□□□ -1.96
POLR2JP52435 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.82□□□□□ -1.96
POLR2JP52435 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.82□□□□□ -1.96
POLR2JP52435 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.82□□□□□ -1.96
POLR2JP52435 ELOCP34-201ENST00000604436 327 ntBASIC2.82□□□□□ -1.96
POLR2JP52435 AC243654.2-201ENST00000612843 443 ntBASIC2.82□□□□□ -1.96
POLR2JP52435 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.82□□□□□ -1.96
POLR2JP52435 AC024341.1-201ENST00000526444 1552 ntBASIC2.82□□□□□ -1.96
POLR2JP52435 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.81□□□□□ -1.96
POLR2JP52435 AC091152.2-201ENST00000591628 2569 ntBASIC2.81□□□□□ -1.96
POLR2JP52435 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.81□□□□□ -1.96
POLR2JP52435 MIR200C-201ENST00000384980 68 ntBASIC2.81□□□□□ -1.96
POLR2JP52435 AC025750.1-201ENST00000399891 379 ntBASIC2.81□□□□□ -1.96
POLR2JP52435 RNU6-603P-201ENST00000411403 107 ntBASIC2.81□□□□□ -1.96
POLR2JP52435 RPL7P8-201ENST00000411964 730 ntBASIC2.81□□□□□ -1.96
POLR2JP52435 AL353678.1-201ENST00000422735 741 ntBASIC2.81□□□□□ -1.96
POLR2JP52435 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms