Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 XIAPP3-201ENST00000312918 795 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CXCL12P48061 RNU6-31P-201ENST00000384388 108 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 MIR93-201ENST00000385024 80 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CXCL12P48061 RPL26P37-201ENST00000411983 438 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 JKAMPP1-201ENST00000413804 919 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.36□□□□□ -1.87
CXCL12P48061 OR6K4P-201ENST00000423179 955 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 RPL35AP12-201ENST00000425362 338 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 FTH1P6-201ENST00000430768 320 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 AC025750.2-201ENST00000442609 450 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 AC021205.1-201ENST00000468797 348 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.36□□□□□ -1.87
CXCL12P48061 AP000926.1-201ENST00000479573 241 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 RPL23AP73-201ENST00000492507 471 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.36□□□□□ -1.87
CXCL12P48061 AC112198.1-201ENST00000505369 1220 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.36□□□□□ -1.87
CXCL12P48061 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.36□□□□□ -1.87
CXCL12P48061 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.36□□□□□ -1.87
CXCL12P48061 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.36□□□□□ -1.87
CXCL12P48061 AC091515.1-201ENST00000548110 679 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 AL121603.1-201ENST00000553815 142 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 AC034105.3-201ENST00000565294 442 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.36□□□□□ -1.87
CXCL12P48061 MIR4644-201ENST00000579929 84 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 AC006539.2-201ENST00000601729 572 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.36□□□□□ -1.87
CXCL12P48061 AC123786.2-201ENST00000603459 275 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 OR2AS2P-201ENST00000606902 342 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 AC116447.1-201ENST00000613153 453 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 AC138932.5-201ENST00000617759 563 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.36□□□□□ -1.87
CXCL12P48061 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.36□□□□□ -1.87
CXCL12P48061 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CXCL12P48061 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CXCL12P48061 AL035425.3-201ENST00000564206 4996 ntBASIC3.36□□□□□ -1.87
CXCL12P48061 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CXCL12P48061 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CXCL12P48061 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.35□□□□□ -1.87
CXCL12P48061 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CXCL12P48061 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CXCL12P48061 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CXCL12P48061 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CXCL12P48061 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CXCL12P48061 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CXCL12P48061 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CXCL12P48061 OR5T3-201ENST00000303059 1023 ntBASIC3.35□□□□□ -1.87
CXCL12P48061 OR5H2-201ENST00000355273 945 ntBASIC3.35□□□□□ -1.87
CXCL12P48061 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CXCL12P48061 RNA5SP197-201ENST00000363357 119 ntBASIC3.35□□□□□ -1.87
CXCL12P48061 RNA5SP42-201ENST00000364278 115 ntBASIC3.35□□□□□ -1.87
CXCL12P48061 SNORA27.3-201ENST00000364937 134 ntBASIC3.35□□□□□ -1.87
CXCL12P48061 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CXCL12P48061 SNORA44-201ENST00000384584 132 ntBASIC3.35□□□□□ -1.87
CXCL12P48061 AL589655.1-201ENST00000405398 482 ntBASIC3.35□□□□□ -1.87
CXCL12P48061 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.35□□□□□ -1.87
CXCL12P48061 AC006989.1-201ENST00000427212 131 ntBASIC3.35□□□□□ -1.87
CXCL12P48061 AC245517.2-201ENST00000442890 346 ntBASIC3.35□□□□□ -1.87
CXCL12P48061 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.35□□□□□ -1.87
CXCL12P48061 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.35□□□□□ -1.87
CXCL12P48061 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.35□□□□□ -1.87
CXCL12P48061 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.35□□□□□ -1.87
CXCL12P48061 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.35□□□□□ -1.87
CXCL12P48061 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.35□□□□□ -1.87
CXCL12P48061 DUXAP6-201ENST00000553858 601 ntBASIC3.35□□□□□ -1.87
CXCL12P48061 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.35□□□□□ -1.87
CXCL12P48061 AC084757.1-201ENST00000559987 490 ntBASIC3.35□□□□□ -1.87
CXCL12P48061 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.35□□□□□ -1.87
CXCL12P48061 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.35□□□□□ -1.87
CXCL12P48061 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.35□□□□□ -1.87
CXCL12P48061 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.35□□□□□ -1.87
CXCL12P48061 AC100814.1-201ENST00000606963 623 ntBASIC3.35□□□□□ -1.87
CXCL12P48061 AC006946.3-201ENST00000609791 756 ntBASIC3.35□□□□□ -1.87
CXCL12P48061 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.35□□□□□ -1.87
CXCL12P48061 AL356321.1-201ENST00000621360 228 ntBASIC3.35□□□□□ -1.87
CXCL12P48061 AC007998.5-201ENST00000622938 237 ntBASIC3.35□□□□□ -1.87
CXCL12P48061 AC145207.9-201ENST00000623802 325 ntBASIC3.35□□□□□ -1.87
CXCL12P48061 AC009452.1-201ENST00000640823 606 ntBASIC3.35□□□□□ -1.87
CXCL12P48061 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CXCL12P48061 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CXCL12P48061 SPATA2P1-201ENST00000431223 2055 ntBASIC3.35□□□□□ -1.87
CXCL12P48061 OR5BR1P-201ENST00000524992 1330 ntBASIC3.35□□□□□ -1.87
CXCL12P48061 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CXCL12P48061 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CXCL12P48061 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CXCL12P48061 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CXCL12P48061 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.34□□□□□ -1.87
CXCL12P48061 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CXCL12P48061 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CXCL12P48061 RNU1-18P-201ENST00000363062 164 ntBASIC3.34□□□□□ -1.87
CXCL12P48061 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CXCL12P48061 RNU6-244P-201ENST00000391028 104 ntBASIC3.34□□□□□ -1.87
CXCL12P48061 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CXCL12P48061 NPM1P10-201ENST00000398310 865 ntBASIC3.34□□□□□ -1.87
CXCL12P48061 RN7SKP222-201ENST00000410651 315 ntBASIC3.34□□□□□ -1.87
CXCL12P48061 RNA5SP39-201ENST00000411245 120 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms