Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 AC108064.1-201ENST00000513791 460 ntBASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 AL671862.1-201ENST00000515851 349 ntBASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 AP005597.4-201ENST00000526762 229 ntBASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 AC122688.1-201ENST00000541494 223 ntBASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 AL512310.1-201ENST00000548639 172 ntBASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 MIR544B-201ENST00000582372 78 ntBASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 MIR4307-201ENST00000582802 84 ntBASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 AC009977.1-201ENST00000586015 570 ntBASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 AC011712.1-201ENST00000588959 234 ntBASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 RPL12P25-202ENST00000598100 674 ntBASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 AL136363.1-201ENST00000605349 337 ntBASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 HSPE1P14-201ENST00000605812 302 ntBASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 AL713922.2-201ENST00000619384 716 ntBASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 AL158801.5-201ENST00000623123 465 ntBASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 FER-202ENST00000438717 1531 ntTSL 2 BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 AL442128.2-201ENST00000620246 1824 ntBASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 RNU6-809P-201ENST00000384461 107 ntBASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 RAB28P1-201ENST00000411517 641 ntBASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 AL590365.1-201ENST00000450788 243 ntBASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 MTCO3P2-201ENST00000457365 171 ntBASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 RNU7-136P-201ENST00000458819 69 ntBASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 AC093267.1-201ENST00000489176 961 ntBASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 IGLV2-34-201ENST00000490007 283 ntBASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 KCTD9P2-201ENST00000512203 1013 ntBASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 RNU6-1281P-201ENST00000516223 105 ntBASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 AC022878.1-201ENST00000530684 149 ntBASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 AP003122.4-201ENST00000530980 758 ntBASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 EDDM3DP-201ENST00000554692 434 ntBASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 VN1R80P-201ENST00000597126 338 ntBASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 AC078899.5-201ENST00000612475 178 ntBASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 AC006378.2-201ENST00000623178 2476 ntBASIC7.09□□□□□ -1.27
CSB-PGBD3P0DP91 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC7.09□□□□□ -1.28
CSB-PGBD3P0DP91 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 MTND5P3-201ENST00000438536 1800 ntBASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 ZNF33BP1-201ENST00000452497 1834 ntBASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 AC021242.1-201ENST00000507315 2035 ntBASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 RNU6-533P-201ENST00000384144 107 ntBASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 DSTNP4-201ENST00000399472 474 ntBASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 RPL23AP17-201ENST00000401064 499 ntBASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 HMGB1P17-201ENST00000403495 628 ntBASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 AC245028.1-201ENST00000423259 256 ntBASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 USP9YP36-201ENST00000424581 829 ntBASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 AC009965.2-201ENST00000425328 970 ntBASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 NPM1P34-201ENST00000428821 893 ntBASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 AC109583.1-201ENST00000432156 268 ntBASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 RPS20P20-201ENST00000460498 340 ntBASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 AC097484.1-201ENST00000471148 389 ntBASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 AC008897.1-201ENST00000494006 347 ntBASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 TRMT10BP1-201ENST00000519377 943 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms