Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC006366.1-201ENST00000422002 759 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.38□□□□□ -1.55
SNRPA1P09661 AL022400.1-201ENST00000423946 935 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 RPL7P44-201ENST00000424827 742 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.38□□□□□ -1.55
SNRPA1P09661 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.38□□□□□ -1.55
SNRPA1P09661 RPS27AP15-201ENST00000447672 466 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.38□□□□□ -1.55
SNRPA1P09661 RPL12P26-201ENST00000452430 487 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 USP9YP10-201ENST00000454868 628 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.38□□□□□ -1.55
SNRPA1P09661 CCDC75P1-201ENST00000469247 791 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 TRBV8-2-201ENST00000475637 270 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
SNRPA1P09661 DYNLL1P6-201ENST00000503440 264 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.38□□□□□ -1.55
SNRPA1P09661 AC008885.2-201ENST00000509506 930 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 AC079395.1-201ENST00000510981 262 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 USP9YP5-201ENST00000511770 630 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 SAP18P1-201ENST00000512058 390 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 FTH1P21-201ENST00000512179 511 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 AC109445.1-201ENST00000512356 383 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 HNRNPKP5-201ENST00000515300 253 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.38□□□□□ -1.55
SNRPA1P09661 HMGB1P23-201ENST00000518743 568 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.38□□□□□ -1.55
SNRPA1P09661 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNRPA1P09661 MED28P5-201ENST00000528254 438 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 AP001317.1-201ENST00000531194 960 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.38□□□□□ -1.55
SNRPA1P09661 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.38□□□□□ -1.55
SNRPA1P09661 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.38□□□□□ -1.55
SNRPA1P09661 AC011260.1-201ENST00000578420 472 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.38□□□□□ -1.55
SNRPA1P09661 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.38□□□□□ -1.55
SNRPA1P09661 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNRPA1P09661 AC023158.2-201ENST00000614876 543 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
SNRPA1P09661 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
SNRPA1P09661 AC092656.1-203ENST00000624134 423 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 AC034229.5-201ENST00000624258 185 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 CDRT1-208ENST00000630868 794 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 AC090582.1-201ENST00000636321 199 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SNRPA1P09661 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNRPA1P09661 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNRPA1P09661 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
SNRPA1P09661 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.38□□□□□ -1.55
SNRPA1P09661 ZNF833P-201ENST00000424938 1494 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.38□□□□□ -1.55
SNRPA1P09661 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNRPA1P09661 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.37□□□□□ -1.55
SNRPA1P09661 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SNRPA1P09661 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SNRPA1P09661 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.37□□□□□ -1.55
SNRPA1P09661 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.37□□□□□ -1.55
SNRPA1P09661 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNRPA1P09661 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNRPA1P09661 RNU6-931P-201ENST00000363850 107 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 RNA5SP22-201ENST00000365393 109 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SNRPA1P09661 Y_RNA.408-201ENST00000383987 102 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 SNORA26.8-201ENST00000391306 124 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 RN7SKP222-201ENST00000410651 315 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 TPT1P2-201ENST00000413105 503 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 AL161449.1-201ENST00000414531 1199 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.37□□□□□ -1.55
SNRPA1P09661 UBTFL3-201ENST00000418934 1024 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 OR6C64P-201ENST00000419708 825 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.37□□□□□ -1.55
SNRPA1P09661 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SNRPA1P09661 OR8F1P-201ENST00000425243 930 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.37□□□□□ -1.55
SNRPA1P09661 MTCO1P54-201ENST00000430139 712 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 PRELID3BP10-201ENST00000431957 584 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.37□□□□□ -1.55
SNRPA1P09661 AP000936.3-201ENST00000438127 255 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 USP9YP22-201ENST00000438971 294 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 ABCF2P2-201ENST00000450549 296 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 TPMTP4-201ENST00000450749 678 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNRPA1P09661 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.37□□□□□ -1.55
SNRPA1P09661 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.37□□□□□ -1.55
SNRPA1P09661 UBTFL6-201ENST00000477929 1024 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.37□□□□□ -1.55
SNRPA1P09661 BNIP3P41-201ENST00000503774 571 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 AC147055.4-201ENST00000504399 745 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 DSTNP2-201ENST00000504533 515 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 AC112198.1-201ENST00000505369 1220 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
SNRPA1P09661 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SNRPA1P09661 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.37□□□□□ -1.55
SNRPA1P09661 Y_RNA.695-201ENST00000516715 107 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC5.37□□□□□ -1.55
SNRPA1P09661 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.37□□□□□ -1.55
SNRPA1P09661 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.37□□□□□ -1.55
SNRPA1P09661 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.37□□□□□ -1.55
SNRPA1P09661 AC005832.3-201ENST00000537929 631 ntBASIC5.37□□□□□ -1.55
SNRPA1P09661 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms