Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CTDNEP1O95476 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CTDNEP1O95476 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.66□□□□□ -1.82
CTDNEP1O95476 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CTDNEP1O95476 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CTDNEP1O95476 RNA5SP267-201ENST00000364893 126 ntBASIC3.65□□□□□ -1.83
CTDNEP1O95476 RNVU1-14-201ENST00000384770 164 ntBASIC3.65□□□□□ -1.83
CTDNEP1O95476 MIR92A2-201ENST00000385299 75 ntBASIC3.65□□□□□ -1.83
CTDNEP1O95476 RN7SKP222-201ENST00000410651 315 ntBASIC3.65□□□□□ -1.83
CTDNEP1O95476 AC009237.5-201ENST00000414271 501 ntBASIC3.65□□□□□ -1.83
CTDNEP1O95476 TRGV6-201ENST00000417928 299 ntBASIC3.65□□□□□ -1.83
CTDNEP1O95476 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.65□□□□□ -1.83
CTDNEP1O95476 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.65□□□□□ -1.83
CTDNEP1O95476 AC091862.1-201ENST00000438016 1100 ntBASIC3.65□□□□□ -1.83
CTDNEP1O95476 AC108734.1-201ENST00000439549 399 ntBASIC3.65□□□□□ -1.83
CTDNEP1O95476 AC245517.2-201ENST00000442890 346 ntBASIC3.65□□□□□ -1.83
CTDNEP1O95476 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.65□□□□□ -1.83
CTDNEP1O95476 AC068305.1-201ENST00000497406 726 ntBASIC3.65□□□□□ -1.83
CTDNEP1O95476 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.65□□□□□ -1.83
CTDNEP1O95476 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.65□□□□□ -1.83
CTDNEP1O95476 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.65□□□□□ -1.83
CTDNEP1O95476 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.65□□□□□ -1.83
CTDNEP1O95476 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.65□□□□□ -1.83
CTDNEP1O95476 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.65□□□□□ -1.83
CTDNEP1O95476 AL606834.2-201ENST00000602954 668 ntBASIC3.65□□□□□ -1.83
CTDNEP1O95476 ABI1P1-201ENST00000603375 1120 ntBASIC3.65□□□□□ -1.83
CTDNEP1O95476 PRELID3BP8-201ENST00000604148 295 ntBASIC3.65□□□□□ -1.83
CTDNEP1O95476 ELOCP35-201ENST00000604289 336 ntBASIC3.65□□□□□ -1.83
CTDNEP1O95476 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.65□□□□□ -1.83
CTDNEP1O95476 AL356490.1-201ENST00000623079 479 ntBASIC3.65□□□□□ -1.83
CTDNEP1O95476 AC092159.4-201ENST00000624944 550 ntBASIC3.65□□□□□ -1.83
CTDNEP1O95476 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.65□□□□□ -1.83
CTDNEP1O95476 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CTDNEP1O95476 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CTDNEP1O95476 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CTDNEP1O95476 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CTDNEP1O95476 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CTDNEP1O95476 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTDNEP1O95476 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTDNEP1O95476 U3.15-201ENST00000365398 212 ntBASIC3.64□□□□□ -1.83
CTDNEP1O95476 SNORA7.4-201ENST00000384249 137 ntBASIC3.64□□□□□ -1.83
CTDNEP1O95476 MIR670-201ENST00000390142 98 ntBASIC3.64□□□□□ -1.83
CTDNEP1O95476 RNA5SP171-201ENST00000391071 115 ntBASIC3.64□□□□□ -1.83
CTDNEP1O95476 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.64□□□□□ -1.83
CTDNEP1O95476 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.64□□□□□ -1.83
CTDNEP1O95476 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.64□□□□□ -1.83
CTDNEP1O95476 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.64□□□□□ -1.83
CTDNEP1O95476 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.64□□□□□ -1.83
CTDNEP1O95476 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.64□□□□□ -1.83
CTDNEP1O95476 RPL31P53-201ENST00000457065 348 ntBASIC3.64□□□□□ -1.83
CTDNEP1O95476 AC087385.1-201ENST00000475062 312 ntBASIC3.64□□□□□ -1.83
CTDNEP1O95476 AC093278.1-201ENST00000494700 600 ntBASIC3.64□□□□□ -1.83
CTDNEP1O95476 AC005912.1-201ENST00000495392 255 ntBASIC3.64□□□□□ -1.83
CTDNEP1O95476 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CTDNEP1O95476 ATG10-AS1-201ENST00000504846 648 ntBASIC3.64□□□□□ -1.83
CTDNEP1O95476 WBP1LP4-201ENST00000505043 344 ntBASIC3.64□□□□□ -1.83
CTDNEP1O95476 TXNP6-201ENST00000510190 310 ntBASIC3.64□□□□□ -1.83
CTDNEP1O95476 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.64□□□□□ -1.83
CTDNEP1O95476 AC010285.3-201ENST00000511668 676 ntBASIC3.64□□□□□ -1.83
CTDNEP1O95476 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.64□□□□□ -1.83
CTDNEP1O95476 IGKV2D-23-201ENST00000518179 286 ntBASIC3.64□□□□□ -1.83
CTDNEP1O95476 AC104997.1-201ENST00000519761 717 ntBASIC3.64□□□□□ -1.83
CTDNEP1O95476 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.64□□□□□ -1.83
CTDNEP1O95476 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.64□□□□□ -1.83
CTDNEP1O95476 UBL5P2-201ENST00000583788 219 ntBASIC3.64□□□□□ -1.83
CTDNEP1O95476 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.64□□□□□ -1.83
CTDNEP1O95476 AL591516.1-201ENST00000611326 274 ntBASIC3.64□□□□□ -1.83
CTDNEP1O95476 C2orf27A-204ENST00000623058 969 ntBASIC3.64□□□□□ -1.83
CTDNEP1O95476 MIR7153-201ENST00000637758 57 ntBASIC3.64□□□□□ -1.83
CTDNEP1O95476 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CTDNEP1O95476 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTDNEP1O95476 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTDNEP1O95476 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTDNEP1O95476 EXOC5P1-201ENST00000510543 1969 ntBASIC3.63□□□□□ -1.83
CTDNEP1O95476 AP001486.2-201ENST00000561652 5113 ntBASIC3.63□□□□□ -1.83
CTDNEP1O95476 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CTDNEP1O95476 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.63□□□□□ -1.83
CTDNEP1O95476 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CTDNEP1O95476 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CTDNEP1O95476 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CTDNEP1O95476 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.63□□□□□ -1.83
CTDNEP1O95476 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.63□□□□□ -1.83
CTDNEP1O95476 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.63□□□□□ -1.83
CTDNEP1O95476 YME1L1P1-201ENST00000429435 297 ntBASIC3.63□□□□□ -1.83
CTDNEP1O95476 HMGB3P6-201ENST00000444896 598 ntBASIC3.63□□□□□ -1.83
CTDNEP1O95476 VN1R34P-201ENST00000447387 883 ntBASIC3.63□□□□□ -1.83
CTDNEP1O95476 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.63□□□□□ -1.83
CTDNEP1O95476 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.63□□□□□ -1.83
CTDNEP1O95476 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.63□□□□□ -1.83
CTDNEP1O95476 AC011037.1-201ENST00000483964 558 ntBASIC3.63□□□□□ -1.83
CTDNEP1O95476 RN7SL20P-201ENST00000488827 297 ntBASIC3.63□□□□□ -1.83
CTDNEP1O95476 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.63□□□□□ -1.83
CTDNEP1O95476 RNA5SP309-201ENST00000516670 106 ntBASIC3.63□□□□□ -1.83
CTDNEP1O95476 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CTDNEP1O95476 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CTDNEP1O95476 AP000619.3-201ENST00000535634 1127 ntBASIC3.63□□□□□ -1.83
CTDNEP1O95476 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CTDNEP1O95476 AC067805.1-201ENST00000559344 470 ntBASIC3.63□□□□□ -1.83
CTDNEP1O95476 AC138932.5-201ENST00000617759 563 ntBASIC3.63□□□□□ -1.83
CTDNEP1O95476 AL133370.2-201ENST00000619934 439 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms