Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC093716.1-201ENST00000435923 377 ntBASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 DNAJC19P1-201ENST00000455312 319 ntBASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 AL136097.1-201ENST00000456945 913 ntBASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 CEACAMP4-201ENST00000457676 421 ntBASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC010468.1-201ENST00000461022 817 ntBASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC006511.1-201ENST00000470614 315 ntBASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 TRAV31-201ENST00000502780 342 ntBASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 HMGB1P3-201ENST00000502802 616 ntBASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC021146.7-201ENST00000509604 775 ntBASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 AL845331.3-202ENST00000562856 261 ntBASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 LINC00557-201ENST00000563184 1279 ntBASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 MTCO3P22-201ENST00000603219 784 ntBASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 MTCO2P22-201ENST00000603246 681 ntBASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 AL450270.1-201ENST00000606160 391 ntBASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC004241.3-201ENST00000611728 517 ntBASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 AL356274.1-201ENST00000617064 410 ntBASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC004972.1-201ENST00000623934 2209 ntBASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TMX2-CTNND1H3BSU7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
TMX2-CTNND1H3BSU7 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
TMX2-CTNND1H3BSU7 AC025125.1-201ENST00000624743 1922 ntBASIC3.46□□□□□ -1.85
TMX2-CTNND1H3BSU7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 TAF9BP1-201ENST00000396646 746 ntBASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 AL136116.1-201ENST00000403591 381 ntBASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 RPL17P35-201ENST00000432217 549 ntBASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 ZNF965P-201ENST00000432501 817 ntBASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC074367.1-201ENST00000438685 1125 ntBASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 RN7SL330P-201ENST00000469709 307 ntBASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC023598.1-201ENST00000472521 361 ntBASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC090543.1-201ENST00000492168 485 ntBASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 FTH1P24-201ENST00000503502 462 ntBASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 HSPD1P15-201ENST00000505573 1122 ntBASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 MTCO1P31-201ENST00000506355 492 ntBASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 OR4V1P-201ENST00000525394 1140 ntBASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 MTND2P13-201ENST00000577438 1039 ntBASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC034236.3-201ENST00000605999 461 ntBASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC103710.3-201ENST00000608157 948 ntBASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 AL512506.1-201ENST00000613918 449 ntBASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 AL732618.1-201ENST00000623251 301 ntBASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TMX2-CTNND1H3BSU7 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 Y_RNA.110-201ENST00000363220 99 ntBASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 RNU4-7P-201ENST00000364758 141 ntBASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 NDUFB4P4-201ENST00000404822 243 ntBASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 RNA5SP120-201ENST00000410900 112 ntBASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 RPS7P13-201ENST00000413955 498 ntBASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.45□□□□□ -1.86
TMX2-CTNND1H3BSU7 OR1AA1P-201ENST00000419597 916 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms