Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RPS29P7-201ENST00000439662 171 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.27□□□□□ -1.89
VAPAQ9P0L0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.27□□□□□ -1.89
VAPAQ9P0L0 BX276092.4-201ENST00000452056 248 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.27□□□□□ -1.89
VAPAQ9P0L0 U8.18-201ENST00000459285 133 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 NDUFA5P9-201ENST00000472609 340 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.27□□□□□ -1.89
VAPAQ9P0L0 MTCO1P31-201ENST00000506355 492 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.27□□□□□ -1.89
VAPAQ9P0L0 FABP5P12-201ENST00000515543 389 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.27□□□□□ -1.89
VAPAQ9P0L0 AC107934.2-201ENST00000518653 310 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 MED28P5-201ENST00000528254 438 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VAPAQ9P0L0 AC010928.3-201ENST00000587712 541 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.27□□□□□ -1.89
VAPAQ9P0L0 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.27□□□□□ -1.89
VAPAQ9P0L0 HMGN2P28-201ENST00000606102 262 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 AC018754.1-201ENST00000607486 925 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 AC022079.2-201ENST00000619739 566 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 AC024023.1-201ENST00000624530 922 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.27□□□□□ -1.89
VAPAQ9P0L0 FAM157B-203ENST00000639350 358 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
VAPAQ9P0L0 AL592494.2-201ENST00000425455 1548 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 HSPA8P19-201ENST00000505359 1517 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.27□□□□□ -1.89
VAPAQ9P0L0 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VAPAQ9P0L0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.26□□□□□ -1.89
VAPAQ9P0L0 AC007496.3-201ENST00000624987 3443 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VAPAQ9P0L0 MFSD8-233ENST00000641482 4860 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
VAPAQ9P0L0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VAPAQ9P0L0 AC032011.1-201ENST00000611703 1549 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.26□□□□□ -1.89
VAPAQ9P0L0 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.26□□□□□ -1.89
VAPAQ9P0L0 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
VAPAQ9P0L0 SNORD3H-201ENST00000384486 214 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.26□□□□□ -1.89
VAPAQ9P0L0 Z86062.1-201ENST00000406773 777 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 ATP5A1P2-201ENST00000412323 255 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 TCEA1P4-201ENST00000415066 844 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 AL356968.1-201ENST00000416622 474 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VAPAQ9P0L0 FAR1P1-201ENST00000427163 934 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 OR51AB1P-201ENST00000429046 620 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
VAPAQ9P0L0 MTND2P21-201ENST00000436242 1042 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 HMGN1P18-201ENST00000457642 277 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 AP002884.2-201ENST00000471647 395 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 NCOR1P1-202ENST00000486162 291 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 OR52A4P-203ENST00000498233 1014 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 AC023141.12-201ENST00000512399 199 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 PHBP14-201ENST00000512887 367 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 AC010265.1-201ENST00000513509 211 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 AC008562.1-201ENST00000521763 330 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 HAUS1P3-201ENST00000523909 662 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 OR8R1P-201ENST00000543943 764 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.26□□□□□ -1.89
VAPAQ9P0L0 UBE2NP1-201ENST00000545592 458 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.26□□□□□ -1.89
VAPAQ9P0L0 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.26□□□□□ -1.89
VAPAQ9P0L0 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.26□□□□□ -1.89
VAPAQ9P0L0 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.26□□□□□ -1.89
VAPAQ9P0L0 HSPE1P5-201ENST00000561489 272 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 MIR5685-201ENST00000579080 79 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.26□□□□□ -1.89
VAPAQ9P0L0 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.26□□□□□ -1.89
VAPAQ9P0L0 AC011492.1-201ENST00000600023 315 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 MIR7153-201ENST00000637758 57 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.26□□□□□ -1.89
VAPAQ9P0L0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VAPAQ9P0L0 AC021755.1-201ENST00000559747 1447 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 AL157700.1-201ENST00000561973 1432 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 AC090337.1-201ENST00000579651 2074 ntBASIC3.26□□□□□ -1.89
VAPAQ9P0L0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VAPAQ9P0L0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VAPAQ9P0L0 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VAPAQ9P0L0 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.25□□□□□ -1.89
VAPAQ9P0L0 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
VAPAQ9P0L0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VAPAQ9P0L0 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VAPAQ9P0L0 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.25□□□□□ -1.89
VAPAQ9P0L0 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
VAPAQ9P0L0 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VAPAQ9P0L0 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.25□□□□□ -1.89
VAPAQ9P0L0 HSPE1P26-201ENST00000405341 275 ntBASIC3.25□□□□□ -1.89
VAPAQ9P0L0 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.25□□□□□ -1.89
VAPAQ9P0L0 GTF2IP23-201ENST00000423746 351 ntBASIC3.25□□□□□ -1.89
VAPAQ9P0L0 AL445528.1-201ENST00000426330 420 ntBASIC3.25□□□□□ -1.89
VAPAQ9P0L0 RSL24D1P6-201ENST00000426934 401 ntBASIC3.25□□□□□ -1.89
VAPAQ9P0L0 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.25□□□□□ -1.89
VAPAQ9P0L0 UBE2V2P3-201ENST00000433562 437 ntBASIC3.25□□□□□ -1.89
VAPAQ9P0L0 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.25□□□□□ -1.89
VAPAQ9P0L0 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.25□□□□□ -1.89
VAPAQ9P0L0 HMGB1P48-201ENST00000446155 598 ntBASIC3.25□□□□□ -1.89
VAPAQ9P0L0 AC097262.1-201ENST00000452559 548 ntBASIC3.25□□□□□ -1.89
VAPAQ9P0L0 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms