Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC023442.1-201ENST00000531247 422 ntBASIC8.13□□□□□ -1.11
RTN4Q9NQC3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 MYL2-203ENST00000548438 664 ntTSL 3 BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 APOC2-204ENST00000591597 447 ntTSL 5 BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 AC093063.1-201ENST00000599317 363 ntBASIC8.13□□□□□ -1.11
RTN4Q9NQC3 AC012119.1-201ENST00000603184 222 ntBASIC8.13□□□□□ -1.11
RTN4Q9NQC3 AL008723.3-201ENST00000608926 449 ntBASIC8.13□□□□□ -1.11
RTN4Q9NQC3 AC040896.1-201ENST00000613819 479 ntBASIC8.13□□□□□ -1.11
RTN4Q9NQC3 RN7SL680P-201ENST00000620379 299 ntBASIC8.13□□□□□ -1.11
RTN4Q9NQC3 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 SNORA75.4-201ENST00000391278 119 ntBASIC8.12□□□□□ -1.11
RTN4Q9NQC3 AC023141.10-201ENST00000415634 200 ntBASIC8.12□□□□□ -1.11
RTN4Q9NQC3 RPL19P21-201ENST00000424919 591 ntBASIC8.12□□□□□ -1.11
RTN4Q9NQC3 AL445928.1-201ENST00000435545 222 ntBASIC8.12□□□□□ -1.11
RTN4Q9NQC3 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 DBIL5P-202ENST00000453414 250 ntBASIC8.12□□□□□ -1.11
RTN4Q9NQC3 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 AC015820.1-201ENST00000473882 321 ntBASIC8.12□□□□□ -1.11
RTN4Q9NQC3 SNRPCP3-201ENST00000474888 476 ntBASIC8.12□□□□□ -1.11
RTN4Q9NQC3 AC008638.1-201ENST00000506035 866 ntBASIC8.12□□□□□ -1.11
RTN4Q9NQC3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 AL359273.1-201ENST00000510918 627 ntBASIC8.12□□□□□ -1.11
RTN4Q9NQC3 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 Y_RNA.708-201ENST00000516950 96 ntBASIC8.12□□□□□ -1.11
RTN4Q9NQC3 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 AC144548.1-201ENST00000549577 324 ntBASIC8.12□□□□□ -1.11
RTN4Q9NQC3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 AC005951.2-201ENST00000576282 495 ntBASIC8.12□□□□□ -1.11
RTN4Q9NQC3 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 SNRPGP15-201ENST00000600149 222 ntBASIC8.12□□□□□ -1.11
RTN4Q9NQC3 AC104695.2-201ENST00000605056 775 ntBASIC8.12□□□□□ -1.11
RTN4Q9NQC3 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 ELMO2P1-202ENST00000614283 794 ntBASIC8.12□□□□□ -1.11
RTN4Q9NQC3 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 MIR6128-201ENST00000615528 109 ntBASIC8.12□□□□□ -1.11
RTN4Q9NQC3 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RTN4Q9NQC3 WNK1-220ENST00000574564 1401 ntBASIC8.12□□□□□ -1.11
RTN4Q9NQC3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 CDY18P-201ENST00000438294 1609 ntBASIC8.11□□□□□ -1.11
RTN4Q9NQC3 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 Y_RNA.112-201ENST00000363250 102 ntBASIC8.11□□□□□ -1.11
RTN4Q9NQC3 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 BX679664.2-201ENST00000439282 283 ntBASIC8.11□□□□□ -1.11
RTN4Q9NQC3 KNOP1P3-201ENST00000446933 426 ntBASIC8.11□□□□□ -1.11
RTN4Q9NQC3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 AC114755.1-201ENST00000453101 868 ntBASIC8.11□□□□□ -1.11
RTN4Q9NQC3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 RNU7-138P-201ENST00000459479 64 ntBASIC8.11□□□□□ -1.11
RTN4Q9NQC3 ALG13-214ENST00000482742 620 ntTSL 2 BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 AC066616.1-201ENST00000486795 413 ntBASIC8.11□□□□□ -1.11
RTN4Q9NQC3 HMGB1P30-201ENST00000492455 606 ntBASIC8.11□□□□□ -1.11
RTN4Q9NQC3 RN7SL57P-201ENST00000493687 290 ntBASIC8.11□□□□□ -1.11
RTN4Q9NQC3 AC096745.1-201ENST00000509945 370 ntBASIC8.11□□□□□ -1.11
RTN4Q9NQC3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 APOOP4-201ENST00000513530 597 ntBASIC8.11□□□□□ -1.11
RTN4Q9NQC3 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 SMURF2P1-201ENST00000514992 481 ntBASIC8.11□□□□□ -1.11
RTN4Q9NQC3 RN7SKP276-201ENST00000516242 268 ntBASIC8.11□□□□□ -1.11
RTN4Q9NQC3 IGKV2D-23-201ENST00000518179 286 ntBASIC8.11□□□□□ -1.11
RTN4Q9NQC3 AC009902.1-201ENST00000519351 183 ntBASIC8.11□□□□□ -1.11
RTN4Q9NQC3 IGKV2-29-201ENST00000521304 372 ntBASIC8.11□□□□□ -1.11
RTN4Q9NQC3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RTN4Q9NQC3 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms