Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AC117525.1-201ENST00000515228 503 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 RN7SKP13-201ENST00000515933 244 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 RNU6-760P-201ENST00000516078 97 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 RNU2-27P-201ENST00000516185 142 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 NPM1P52-201ENST00000518264 846 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 TRMT10BP1-201ENST00000519377 943 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AP001636.2-201ENST00000525517 696 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AC006270.2-201ENST00000578523 652 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AC067852.4-201ENST00000590314 478 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 BNIP3P19-201ENST00000605397 577 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AL355802.4-201ENST00000607635 548 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AC253576.2-201ENST00000618815 580 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AC069209.1-201ENST00000619282 651 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 LINC00216-201ENST00000623548 1126 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AC138649.5-201ENST00000637456 137 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AL513302.2-201ENST00000562313 1842 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AL356274.2-201ENST00000624379 3752 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AL133383.2-201ENST00000622958 2336 ntBASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.2□□□□□ -1.9
RSPO3Q9BXY4 AC087565.3-202ENST00000642085 1603 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 RNA5SP167-201ENST00000365461 116 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 MIR421-201ENST00000365696 85 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 MIR34B-201ENST00000385076 84 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 RAB9AP3-201ENST00000412737 573 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 AC069157.1-201ENST00000421749 137 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 AC009965.2-201ENST00000425328 970 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 RPS3AP12-201ENST00000443616 753 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 RAB9AP1-201ENST00000449393 573 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 SNRPGP3-201ENST00000469405 227 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 AC092451.1-201ENST00000480211 153 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 MTCO1P30-201ENST00000515244 580 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 RN7SKP60-201ENST00000516985 239 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 AP000619.3-201ENST00000535634 1127 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 CCNG2P1-201ENST00000549521 1000 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 AC005476.1-201ENST00000554427 397 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 RN7SL339P-201ENST00000580597 296 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 AL161756.2-201ENST00000604597 246 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 AL512506.1-201ENST00000613918 449 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 AP002371.2-201ENST00000624450 503 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 AC090337.1-201ENST00000579651 2074 ntBASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RSPO3Q9BXY4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 GABPAP-201ENST00000419271 1356 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 RNU6-697P-201ENST00000363348 107 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 PTMAP5-201ENST00000393073 333 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 RPL21P17-201ENST00000397467 475 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 RN7SKP285-201ENST00000410137 318 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 GTF2IP23-201ENST00000423746 351 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 CYCSP4-201ENST00000429682 331 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 ARF4P2-201ENST00000430209 526 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 MTCO1P45-201ENST00000431457 267 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 GOT2P5-201ENST00000433995 546 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms