Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SNORD113.2-201ENST00000364166 89 ntBASIC3.72□□□□□ -1.81
RFT1Q96AA3 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.72□□□□□ -1.81
RFT1Q96AA3 RNA5SP87-201ENST00000384155 118 ntBASIC3.72□□□□□ -1.81
RFT1Q96AA3 AL136133.1-201ENST00000413694 376 ntBASIC3.72□□□□□ -1.81
RFT1Q96AA3 AC106883.1-201ENST00000418805 562 ntBASIC3.72□□□□□ -1.81
RFT1Q96AA3 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.72□□□□□ -1.81
RFT1Q96AA3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.72□□□□□ -1.81
RFT1Q96AA3 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.72□□□□□ -1.81
RFT1Q96AA3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.72□□□□□ -1.81
RFT1Q96AA3 Z80107.1-201ENST00000436830 412 ntBASIC3.72□□□□□ -1.81
RFT1Q96AA3 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.72□□□□□ -1.81
RFT1Q96AA3 AC004854.1-201ENST00000440356 349 ntBASIC3.72□□□□□ -1.81
RFT1Q96AA3 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.72□□□□□ -1.81
RFT1Q96AA3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
RFT1Q96AA3 RPL23AP62-201ENST00000463396 453 ntBASIC3.72□□□□□ -1.81
RFT1Q96AA3 AC007537.2-201ENST00000472093 511 ntBASIC3.72□□□□□ -1.81
RFT1Q96AA3 RPL7P47-201ENST00000497299 556 ntBASIC3.72□□□□□ -1.81
RFT1Q96AA3 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.72□□□□□ -1.81
RFT1Q96AA3 TRAV31-201ENST00000502780 342 ntBASIC3.72□□□□□ -1.81
RFT1Q96AA3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RFT1Q96AA3 RNA5SP143-201ENST00000516936 115 ntBASIC3.72□□□□□ -1.81
RFT1Q96AA3 IGLVIV-65-201ENST00000517313 360 ntBASIC3.72□□□□□ -1.81
RFT1Q96AA3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.72□□□□□ -1.81
RFT1Q96AA3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.72□□□□□ -1.81
RFT1Q96AA3 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.72□□□□□ -1.81
RFT1Q96AA3 AC092470.1-201ENST00000546187 132 ntBASIC3.72□□□□□ -1.81
RFT1Q96AA3 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.72□□□□□ -1.81
RFT1Q96AA3 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.72□□□□□ -1.81
RFT1Q96AA3 SULT1C2P1-202ENST00000562418 459 ntBASIC3.72□□□□□ -1.81
RFT1Q96AA3 AC005412.1-201ENST00000580812 1049 ntBASIC3.72□□□□□ -1.81
RFT1Q96AA3 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.72□□□□□ -1.81
RFT1Q96AA3 AC006116.5-201ENST00000591936 559 ntBASIC3.72□□□□□ -1.81
RFT1Q96AA3 AP001160.4-201ENST00000596971 382 ntBASIC3.72□□□□□ -1.81
RFT1Q96AA3 AL354984.3-201ENST00000604803 325 ntBASIC3.72□□□□□ -1.81
RFT1Q96AA3 AC069545.1-201ENST00000605671 358 ntBASIC3.72□□□□□ -1.81
RFT1Q96AA3 AP003392.5-201ENST00000607857 415 ntBASIC3.72□□□□□ -1.81
RFT1Q96AA3 AC012531.5-201ENST00000611375 151 ntBASIC3.72□□□□□ -1.81
RFT1Q96AA3 AC064801.1-201ENST00000612025 407 ntBASIC3.72□□□□□ -1.81
RFT1Q96AA3 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.72□□□□□ -1.81
RFT1Q96AA3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
RFT1Q96AA3 AC125257.1-201ENST00000560400 2930 ntBASIC3.72□□□□□ -1.81
RFT1Q96AA3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RFT1Q96AA3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RFT1Q96AA3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
RFT1Q96AA3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
RFT1Q96AA3 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.71□□□□□ -1.82
RFT1Q96AA3 AC090337.1-201ENST00000579651 2074 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
RFT1Q96AA3 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RFT1Q96AA3 snoZ40.1-201ENST00000364540 72 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.71□□□□□ -1.82
RFT1Q96AA3 SNORA40.2-201ENST00000390847 128 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 RNU6-1300P-201ENST00000391046 108 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 AL355379.1-201ENST00000405542 640 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.71□□□□□ -1.82
RFT1Q96AA3 LUZP4P1-201ENST00000415420 344 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.71□□□□□ -1.82
RFT1Q96AA3 OR4K6P-201ENST00000416478 897 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 AL139095.3-201ENST00000419672 1203 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 AC005517.2-201ENST00000424673 553 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.71□□□□□ -1.82
RFT1Q96AA3 AC087650.1-201ENST00000431445 468 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.71□□□□□ -1.82
RFT1Q96AA3 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.71□□□□□ -1.82
RFT1Q96AA3 CKS1BP5-201ENST00000434172 273 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.71□□□□□ -1.82
RFT1Q96AA3 LYPLA1P1-201ENST00000434514 622 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 CEACAMP9-201ENST00000442990 513 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 EXOSC3P1-201ENST00000448649 500 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
RFT1Q96AA3 AC104073.1-201ENST00000451988 151 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 RAD23BP3-201ENST00000454157 1152 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.71□□□□□ -1.82
RFT1Q96AA3 HMGB3P30-201ENST00000457863 606 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
RFT1Q96AA3 AP001086.1-201ENST00000494882 321 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.71□□□□□ -1.82
RFT1Q96AA3 MTCYBP37-201ENST00000510642 1133 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RFT1Q96AA3 SNORA48.10-201ENST00000516965 160 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.71□□□□□ -1.82
RFT1Q96AA3 AC027309.2-201ENST00000520566 192 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 OR5D15P-201ENST00000531671 942 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.71□□□□□ -1.82
RFT1Q96AA3 MIR3912-201ENST00000577566 105 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 MIR4509-3-201ENST00000578671 94 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 MIR4480-201ENST00000582492 71 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.71□□□□□ -1.82
RFT1Q96AA3 MIR4509-2-201ENST00000583920 94 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RFT1Q96AA3 AL160237.3-201ENST00000604114 1013 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 AL021707.7-201ENST00000607991 416 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 MIR4509-1-201ENST00000618224 94 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 AC007546.1-201ENST00000619452 559 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.71□□□□□ -1.82
RFT1Q96AA3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.71□□□□□ -1.82
RFT1Q96AA3 ZNF663P-202ENST00000641770 1131 ntBASIC3.71□□□□□ -1.82
RFT1Q96AA3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.71□□□□□ -1.82
RFT1Q96AA3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
RFT1Q96AA3 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms