Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
HLA-CQ95604 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
HLA-CQ95604 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.68□□□□□ -1.34
HLA-CQ95604 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
HLA-CQ95604 AC074141.1-201ENST00000588129 2995 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HLA-CQ95604 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
HLA-CQ95604 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.68□□□□□ -1.34
HLA-CQ95604 AL137003.2-201ENST00000606924 2538 ntBASIC6.68□□□□□ -1.34
HLA-CQ95604 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HLA-CQ95604 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-CQ95604 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-CQ95604 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-CQ95604 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC6.67□□□□□ -1.34
HLA-CQ95604 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
HLA-CQ95604 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-CQ95604 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-CQ95604 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
HLA-CQ95604 TMEM75-201ENST00000624314 2165 ntBASIC6.67□□□□□ -1.34
HLA-CQ95604 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-CQ95604 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-CQ95604 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
HLA-CQ95604 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-CQ95604 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.67□□□□□ -1.34
HLA-CQ95604 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-CQ95604 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-CQ95604 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-CQ95604 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
HLA-CQ95604 AC069218.2-201ENST00000411665 344 ntBASIC6.67□□□□□ -1.34
HLA-CQ95604 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.67□□□□□ -1.34
HLA-CQ95604 AC069213.2-201ENST00000420238 366 ntBASIC6.67□□□□□ -1.34
HLA-CQ95604 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.67□□□□□ -1.34
HLA-CQ95604 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.67□□□□□ -1.34
HLA-CQ95604 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.67□□□□□ -1.34
HLA-CQ95604 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.67□□□□□ -1.34
HLA-CQ95604 AC090686.1-201ENST00000481577 749 ntBASIC6.67□□□□□ -1.34
HLA-CQ95604 UBA52P7-201ENST00000486088 380 ntBASIC6.67□□□□□ -1.34
HLA-CQ95604 RN7SL193P-201ENST00000491708 276 ntBASIC6.67□□□□□ -1.34
HLA-CQ95604 AC026979.1-201ENST00000492525 396 ntBASIC6.67□□□□□ -1.34
HLA-CQ95604 AC093852.1-201ENST00000503587 266 ntBASIC6.67□□□□□ -1.34
HLA-CQ95604 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.67□□□□□ -1.34
HLA-CQ95604 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC6.67□□□□□ -1.34
HLA-CQ95604 SCARNA16.2-201ENST00000516520 172 ntBASIC6.67□□□□□ -1.34
HLA-CQ95604 RNA5SP434-201ENST00000516647 121 ntBASIC6.67□□□□□ -1.34
HLA-CQ95604 Y_RNA.715-201ENST00000517082 110 ntBASIC6.67□□□□□ -1.34
HLA-CQ95604 AC007991.1-201ENST00000522680 631 ntBASIC6.67□□□□□ -1.34
HLA-CQ95604 HSBP1P1-201ENST00000555205 166 ntBASIC6.67□□□□□ -1.34
HLA-CQ95604 AL121576.1-201ENST00000556055 276 ntBASIC6.67□□□□□ -1.34
HLA-CQ95604 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC6.67□□□□□ -1.34
HLA-CQ95604 MIR3128-201ENST00000581957 66 ntBASIC6.67□□□□□ -1.34
HLA-CQ95604 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.67□□□□□ -1.34
HLA-CQ95604 AC011494.1-201ENST00000596454 237 ntBASIC6.67□□□□□ -1.34
HLA-CQ95604 AC078899.3-201ENST00000599065 212 ntBASIC6.67□□□□□ -1.34
HLA-CQ95604 AL138889.2-201ENST00000603883 242 ntBASIC6.67□□□□□ -1.34
HLA-CQ95604 MIR6793-201ENST00000612376 63 ntBASIC6.67□□□□□ -1.34
HLA-CQ95604 DUSP12P1-201ENST00000612874 516 ntBASIC6.67□□□□□ -1.34
HLA-CQ95604 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.67□□□□□ -1.34
HLA-CQ95604 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.67□□□□□ -1.34
HLA-CQ95604 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-CQ95604 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.67□□□□□ -1.34
HLA-CQ95604 AL731566.1-201ENST00000620490 1937 ntBASIC6.67□□□□□ -1.34
HLA-CQ95604 AC009951.1-201ENST00000623674 2614 ntBASIC6.67□□□□□ -1.34
HLA-CQ95604 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-CQ95604 AC016251.2-201ENST00000623393 3089 ntBASIC6.67□□□□□ -1.34
HLA-CQ95604 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
HLA-CQ95604 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
HLA-CQ95604 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HLA-CQ95604 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
HLA-CQ95604 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC6.66□□□□□ -1.34
HLA-CQ95604 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-CQ95604 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
HLA-CQ95604 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-CQ95604 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-CQ95604 FLJ42393-201ENST00000623801 2270 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.66□□□□□ -1.34
HLA-CQ95604 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-CQ95604 AL359976.1-201ENST00000418655 3528 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-CQ95604 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.66□□□□□ -1.34
HLA-CQ95604 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 AC005332.9-201ENST00000620266 2921 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 OR13C1P-202ENST00000641378 2919 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
HLA-CQ95604 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-CQ95604 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-CQ95604 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
HLA-CQ95604 OR56A5-201ENST00000340110 738 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 Y_RNA.14-201ENST00000362415 103 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 RNU6-200P-201ENST00000364743 107 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 SNORD14.1-201ENST00000365609 90 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-CQ95604 SNORA70-201ENST00000384436 135 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 Y_RNA.518-201ENST00000384552 113 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.66□□□□□ -1.34
HLA-CQ95604 AC243428.1-201ENST00000421099 264 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 AC139712.2-201ENST00000424302 339 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 SDAD1P3-201ENST00000427380 333 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 AC005094.1-201ENST00000440420 368 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 AL590664.1-201ENST00000448065 339 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms