Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TOPBP1Q92547 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TOPBP1Q92547 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC5.01□□□□□ -1.61
TOPBP1Q92547 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TOPBP1Q92547 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TOPBP1Q92547 SNORA9.2-201ENST00000365361 133 ntBASIC5.01□□□□□ -1.61
TOPBP1Q92547 AL445528.1-201ENST00000426330 420 ntBASIC5.01□□□□□ -1.61
TOPBP1Q92547 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC5.01□□□□□ -1.61
TOPBP1Q92547 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.01□□□□□ -1.61
TOPBP1Q92547 FDX1P2-201ENST00000450769 375 ntBASIC5.01□□□□□ -1.61
TOPBP1Q92547 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.01□□□□□ -1.61
TOPBP1Q92547 CYP2C60P-201ENST00000566088 139 ntBASIC5.01□□□□□ -1.61
TOPBP1Q92547 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TOPBP1Q92547 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.01□□□□□ -1.61
TOPBP1Q92547 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
TOPBP1Q92547 RPS4XP5-202ENST00000449995 1334 ntBASIC5□□□□□ -1.61
TOPBP1Q92547 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
TOPBP1Q92547 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5□□□□□ -1.61
TOPBP1Q92547 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5□□□□□ -1.61
TOPBP1Q92547 RPL12P26-201ENST00000452430 487 ntBASIC5□□□□□ -1.61
TOPBP1Q92547 AC010469.1-201ENST00000463864 576 ntBASIC5□□□□□ -1.61
TOPBP1Q92547 HSPE1P6-201ENST00000479457 291 ntBASIC5□□□□□ -1.61
TOPBP1Q92547 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5□□□□□ -1.61
TOPBP1Q92547 AC096947.1-201ENST00000603233 470 ntBASIC5□□□□□ -1.61
TOPBP1Q92547 AC079298.2-201ENST00000623885 459 ntBASIC5□□□□□ -1.61
TOPBP1Q92547 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5□□□□□ -1.61
TOPBP1Q92547 AC093849.1-201ENST00000563631 2209 ntBASIC5□□□□□ -1.61
TOPBP1Q92547 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.99□□□□□ -1.61
TOPBP1Q92547 AC104297.1-201ENST00000393779 870 ntBASIC4.99□□□□□ -1.61
TOPBP1Q92547 AL513328.1-201ENST00000446460 224 ntBASIC4.99□□□□□ -1.61
TOPBP1Q92547 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.99□□□□□ -1.61
TOPBP1Q92547 RPL23AP71-201ENST00000470966 469 ntBASIC4.99□□□□□ -1.61
TOPBP1Q92547 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.99□□□□□ -1.61
TOPBP1Q92547 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.99□□□□□ -1.61
TOPBP1Q92547 OR1AB1P-201ENST00000585564 761 ntBASIC4.99□□□□□ -1.61
TOPBP1Q92547 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TOPBP1Q92547 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.99□□□□□ -1.61
TOPBP1Q92547 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
TOPBP1Q92547 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.99□□□□□ -1.61
TOPBP1Q92547 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TOPBP1Q92547 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.98□□□□□ -1.61
TOPBP1Q92547 ARL5AP4-201ENST00000430731 512 ntBASIC4.98□□□□□ -1.61
TOPBP1Q92547 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.98□□□□□ -1.61
TOPBP1Q92547 NPM1P29-201ENST00000483112 803 ntBASIC4.98□□□□□ -1.61
TOPBP1Q92547 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.98□□□□□ -1.61
TOPBP1Q92547 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.98□□□□□ -1.61
TOPBP1Q92547 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.98□□□□□ -1.61
TOPBP1Q92547 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.98□□□□□ -1.61
TOPBP1Q92547 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
TOPBP1Q92547 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TOPBP1Q92547 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.98□□□□□ -1.61
TOPBP1Q92547 AC017007.4-201ENST00000503353 1352 ntBASIC4.98□□□□□ -1.61
TOPBP1Q92547 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TOPBP1Q92547 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
TOPBP1Q92547 RANP4-201ENST00000413361 655 ntBASIC4.97□□□□□ -1.61
TOPBP1Q92547 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.97□□□□□ -1.61
TOPBP1Q92547 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.97□□□□□ -1.61
TOPBP1Q92547 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.97□□□□□ -1.61
TOPBP1Q92547 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.97□□□□□ -1.61
TOPBP1Q92547 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.97□□□□□ -1.61
TOPBP1Q92547 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.97□□□□□ -1.61
TOPBP1Q92547 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.97□□□□□ -1.61
TOPBP1Q92547 AC103858.2-201ENST00000621471 543 ntBASIC4.97□□□□□ -1.61
TOPBP1Q92547 PLCE1P1-201ENST00000622094 305 ntBASIC4.97□□□□□ -1.61
TOPBP1Q92547 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TOPBP1Q92547 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TOPBP1Q92547 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
TOPBP1Q92547 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
TOPBP1Q92547 RNU1-89P-201ENST00000384592 164 ntBASIC4.97□□□□□ -1.61
TOPBP1Q92547 AL160275.2-201ENST00000412010 394 ntBASIC4.97□□□□□ -1.61
TOPBP1Q92547 DUTP6-201ENST00000425573 462 ntBASIC4.97□□□□□ -1.61
TOPBP1Q92547 RAB28P3-201ENST00000448325 597 ntBASIC4.97□□□□□ -1.61
TOPBP1Q92547 NIPA2P5-201ENST00000452282 464 ntBASIC4.97□□□□□ -1.61
TOPBP1Q92547 MTCO3P20-201ENST00000454926 688 ntBASIC4.97□□□□□ -1.61
TOPBP1Q92547 AL136097.1-201ENST00000456945 913 ntBASIC4.97□□□□□ -1.61
TOPBP1Q92547 UBL5P3-201ENST00000475112 231 ntBASIC4.97□□□□□ -1.61
TOPBP1Q92547 AP000916.1-201ENST00000533869 835 ntBASIC4.97□□□□□ -1.61
TOPBP1Q92547 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.97□□□□□ -1.61
TOPBP1Q92547 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.97□□□□□ -1.61
TOPBP1Q92547 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.97□□□□□ -1.61
TOPBP1Q92547 MIR4727-201ENST00000622232 55 ntBASIC4.97□□□□□ -1.61
TOPBP1Q92547 AC108206.1-201ENST00000570186 4159 ntBASIC4.97□□□□□ -1.61
TOPBP1Q92547 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
TOPBP1Q92547 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
TOPBP1Q92547 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.96□□□□□ -1.62
TOPBP1Q92547 MIR30E-201ENST00000362104 92 ntBASIC4.96□□□□□ -1.62
TOPBP1Q92547 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.96□□□□□ -1.62
TOPBP1Q92547 MIR887-201ENST00000401258 79 ntBASIC4.96□□□□□ -1.62
TOPBP1Q92547 NPM1P38-201ENST00000403835 865 ntBASIC4.96□□□□□ -1.62
TOPBP1Q92547 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.96□□□□□ -1.62
TOPBP1Q92547 HMGB3P11-201ENST00000440127 604 ntBASIC4.96□□□□□ -1.62
TOPBP1Q92547 AC111000.2-201ENST00000507775 550 ntBASIC4.96□□□□□ -1.62
TOPBP1Q92547 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TOPBP1Q92547 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.96□□□□□ -1.62
TOPBP1Q92547 AC007566.2-201ENST00000603642 413 ntBASIC4.96□□□□□ -1.62
TOPBP1Q92547 AC091903.1-201ENST00000624322 454 ntBASIC4.96□□□□□ -1.62
TOPBP1Q92547 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TOPBP1Q92547 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TOPBP1Q92547 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
TOPBP1Q92547 MIR9-1-201ENST00000385198 89 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms