Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PRPF39Q86UA1 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.32□□□□□ -1.72
PRPF39Q86UA1 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.32□□□□□ -1.72
PRPF39Q86UA1 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.32□□□□□ -1.72
PRPF39Q86UA1 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.32□□□□□ -1.72
PRPF39Q86UA1 MTCYBP27-201ENST00000555160 670 ntBASIC4.32□□□□□ -1.72
PRPF39Q86UA1 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.32□□□□□ -1.72
PRPF39Q86UA1 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.32□□□□□ -1.72
PRPF39Q86UA1 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.32□□□□□ -1.72
PRPF39Q86UA1 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.32□□□□□ -1.72
PRPF39Q86UA1 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.32□□□□□ -1.72
PRPF39Q86UA1 AL157770.1-201ENST00000623049 439 ntBASIC4.32□□□□□ -1.72
PRPF39Q86UA1 C2orf27A-204ENST00000623058 969 ntBASIC4.32□□□□□ -1.72
PRPF39Q86UA1 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.32□□□□□ -1.72
PRPF39Q86UA1 AC104985.3-201ENST00000623479 597 ntBASIC4.32□□□□□ -1.72
PRPF39Q86UA1 AC112484.5-201ENST00000624189 228 ntBASIC4.32□□□□□ -1.72
PRPF39Q86UA1 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.32□□□□□ -1.72
PRPF39Q86UA1 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PRPF39Q86UA1 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PRPF39Q86UA1 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.32□□□□□ -1.72
PRPF39Q86UA1 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.32□□□□□ -1.72
PRPF39Q86UA1 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.32□□□□□ -1.72
PRPF39Q86UA1 AC097504.1-201ENST00000515103 2415 ntBASIC4.32□□□□□ -1.72
PRPF39Q86UA1 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PRPF39Q86UA1 ZNF734P-201ENST00000419494 1534 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRPF39Q86UA1 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRPF39Q86UA1 RNU1-14P-201ENST00000362759 152 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 RNU5E-10P-201ENST00000363506 118 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 RNU6-707P-201ENST00000364647 95 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PRPF39Q86UA1 RNU6-1300P-201ENST00000391046 108 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 AL161909.1-201ENST00000397390 712 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 AL603766.1-201ENST00000407763 664 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 RNA5SP36-201ENST00000410197 133 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.31□□□□□ -1.72
PRPF39Q86UA1 RAC1P8-201ENST00000427086 527 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.31□□□□□ -1.72
PRPF39Q86UA1 HIGD1AP12-201ENST00000427832 281 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 SEPT7P5-201ENST00000434048 306 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.31□□□□□ -1.72
PRPF39Q86UA1 MTCO1P53-201ENST00000441633 699 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 RPL23AP16-201ENST00000441715 421 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 HSFY6P-201ENST00000445573 403 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 COX6CP18-201ENST00000448769 222 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 TRBV26-201ENST00000456572 344 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 RN7SL585P-201ENST00000470538 280 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 AC020898.1-201ENST00000474167 787 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
PRPF39Q86UA1 BNIP3P41-201ENST00000503774 571 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.31□□□□□ -1.72
PRPF39Q86UA1 AL592156.1-201ENST00000508758 304 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 TMEM248P1-201ENST00000510579 951 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRPF39Q86UA1 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.31□□□□□ -1.72
PRPF39Q86UA1 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.31□□□□□ -1.72
PRPF39Q86UA1 RNA5SP519-201ENST00000516480 119 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.31□□□□□ -1.72
PRPF39Q86UA1 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.31□□□□□ -1.72
PRPF39Q86UA1 AP001189.2-201ENST00000527320 189 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 ZNF705CP-201ENST00000530515 889 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.31□□□□□ -1.72
PRPF39Q86UA1 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PRPF39Q86UA1 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.31□□□□□ -1.72
PRPF39Q86UA1 AC092954.1-201ENST00000609121 445 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.31□□□□□ -1.72
PRPF39Q86UA1 AC123767.1-202ENST00000620407 817 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 AC067931.1-201ENST00000624190 671 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 AC008785.1-201ENST00000624475 456 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRPF39Q86UA1 AL133243.3-201ENST00000617415 3004 ntBASIC4.31□□□□□ -1.72
PRPF39Q86UA1 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PRPF39Q86UA1 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 RNU1-64P-201ENST00000365443 163 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 RNA5SP167-201ENST00000365461 116 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 SNORA37-201ENST00000384504 129 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 EIF5P1-201ENST00000400019 1231 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 RNA5SP317-201ENST00000410176 116 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 RNA5SP311-201ENST00000411290 116 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 JKAMPP1-201ENST00000413804 919 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 RPF2P1-201ENST00000424137 906 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 MTCO1P54-201ENST00000430139 712 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 AC241584.1-201ENST00000438469 1241 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms