Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AL031736.2-201ENST00000426573 787 ntBASIC2.11□□□□□ -2.07
CSMD3Q7Z407 FTH1P6-201ENST00000430768 320 ntBASIC2.11□□□□□ -2.07
CSMD3Q7Z407 RPS24P13-201ENST00000442520 397 ntBASIC2.11□□□□□ -2.07
CSMD3Q7Z407 AC073587.1-201ENST00000447093 876 ntBASIC2.11□□□□□ -2.07
CSMD3Q7Z407 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CSMD3Q7Z407 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.11□□□□□ -2.07
CSMD3Q7Z407 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.11□□□□□ -2.07
CSMD3Q7Z407 AP003122.3-201ENST00000526316 255 ntBASIC2.11□□□□□ -2.07
CSMD3Q7Z407 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.11□□□□□ -2.07
CSMD3Q7Z407 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CSMD3Q7Z407 AC007566.2-201ENST00000603642 413 ntBASIC2.11□□□□□ -2.07
CSMD3Q7Z407 AC098826.3-201ENST00000603823 466 ntBASIC2.11□□□□□ -2.07
CSMD3Q7Z407 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CSMD3Q7Z407 MIR448-201ENST00000362131 111 ntBASIC2.11□□□□□ -2.07
CSMD3Q7Z407 MIR34A-201ENST00000385130 110 ntBASIC2.11□□□□□ -2.07
CSMD3Q7Z407 MIR513A2-201ENST00000385249 127 ntBASIC2.11□□□□□ -2.07
CSMD3Q7Z407 SEPT7P2-202ENST00000398921 823 ntBASIC2.11□□□□□ -2.07
CSMD3Q7Z407 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.11□□□□□ -2.07
CSMD3Q7Z407 AL591806.2-201ENST00000433122 173 ntBASIC2.11□□□□□ -2.07
CSMD3Q7Z407 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.11□□□□□ -2.07
CSMD3Q7Z407 AL513328.1-201ENST00000446460 224 ntBASIC2.11□□□□□ -2.07
CSMD3Q7Z407 AC017037.2-201ENST00000513850 890 ntBASIC2.11□□□□□ -2.07
CSMD3Q7Z407 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC2.11□□□□□ -2.07
CSMD3Q7Z407 MYL12AP1-201ENST00000518490 515 ntBASIC2.11□□□□□ -2.07
CSMD3Q7Z407 AL358913.1-201ENST00000554342 121 ntBASIC2.11□□□□□ -2.07
CSMD3Q7Z407 OR7A8P-201ENST00000595427 913 ntBASIC2.11□□□□□ -2.07
CSMD3Q7Z407 AC096947.1-201ENST00000603233 470 ntBASIC2.11□□□□□ -2.07
CSMD3Q7Z407 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.11□□□□□ -2.07
CSMD3Q7Z407 AC007619.2-201ENST00000605743 379 ntBASIC2.11□□□□□ -2.07
CSMD3Q7Z407 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC2.11□□□□□ -2.07
CSMD3Q7Z407 AL356274.1-201ENST00000617064 410 ntBASIC2.11□□□□□ -2.07
CSMD3Q7Z407 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.11□□□□□ -2.07
CSMD3Q7Z407 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CSMD3Q7Z407 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
CSMD3Q7Z407 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CSMD3Q7Z407 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CSMD3Q7Z407 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.11□□□□□ -2.07
CSMD3Q7Z407 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
CSMD3Q7Z407 RNA5SP68-201ENST00000363885 119 ntBASIC2.11□□□□□ -2.07
CSMD3Q7Z407 JKAMPP1-201ENST00000413804 919 ntBASIC2.11□□□□□ -2.07
CSMD3Q7Z407 AC007563.3-201ENST00000433233 371 ntBASIC2.11□□□□□ -2.07
CSMD3Q7Z407 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.11□□□□□ -2.07
CSMD3Q7Z407 METTL15P1-201ENST00000481421 1045 ntBASIC2.11□□□□□ -2.07
CSMD3Q7Z407 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CSMD3Q7Z407 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CSMD3Q7Z407 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.11□□□□□ -2.07
CSMD3Q7Z407 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CSMD3Q7Z407 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC2.1□□□□□ -2.07
CSMD3Q7Z407 UBL5P3-201ENST00000475112 231 ntBASIC2.1□□□□□ -2.07
CSMD3Q7Z407 HMGB3P14-201ENST00000494195 599 ntBASIC2.1□□□□□ -2.07
CSMD3Q7Z407 BTF3L4P4-201ENST00000506381 449 ntBASIC2.1□□□□□ -2.07
CSMD3Q7Z407 HIGD1AP13-201ENST00000509878 289 ntBASIC2.1□□□□□ -2.07
CSMD3Q7Z407 IGKV2-36-201ENST00000519999 223 ntBASIC2.1□□□□□ -2.07
CSMD3Q7Z407 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.1□□□□□ -2.07
CSMD3Q7Z407 AADACP1-206ENST00000561502 1193 ntBASIC2.1□□□□□ -2.07
CSMD3Q7Z407 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC2.1□□□□□ -2.07
CSMD3Q7Z407 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC2.1□□□□□ -2.07
CSMD3Q7Z407 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CSMD3Q7Z407 HLFP1-201ENST00000402375 499 ntBASIC2.1□□□□□ -2.07
CSMD3Q7Z407 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC2.1□□□□□ -2.07
CSMD3Q7Z407 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC2.1□□□□□ -2.07
CSMD3Q7Z407 AC112492.1-201ENST00000449607 712 ntBASIC2.1□□□□□ -2.07
CSMD3Q7Z407 RPL12P26-201ENST00000452430 487 ntBASIC2.1□□□□□ -2.07
CSMD3Q7Z407 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.1□□□□□ -2.07
CSMD3Q7Z407 AC025181.1-201ENST00000477507 416 ntBASIC2.1□□□□□ -2.07
CSMD3Q7Z407 PCBP2P3-201ENST00000509726 843 ntBASIC2.1□□□□□ -2.07
CSMD3Q7Z407 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.1□□□□□ -2.07
CSMD3Q7Z407 WDR61-205ENST00000558459 884 ntTSL 3 BASIC2.1□□□□□ -2.07
CSMD3Q7Z407 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
CSMD3Q7Z407 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
CSMD3Q7Z407 AL121834.1-202ENST00000404494 277 ntBASIC2.09□□□□□ -2.07
CSMD3Q7Z407 RNA5SP184-201ENST00000411071 108 ntBASIC2.09□□□□□ -2.07
CSMD3Q7Z407 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC2.09□□□□□ -2.07
CSMD3Q7Z407 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CSMD3Q7Z407 MTND2P25-201ENST00000449028 610 ntBASIC2.09□□□□□ -2.07
CSMD3Q7Z407 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC2.09□□□□□ -2.07
CSMD3Q7Z407 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.09□□□□□ -2.07
CSMD3Q7Z407 KLHL2P1-201ENST00000508691 521 ntBASIC2.09□□□□□ -2.07
CSMD3Q7Z407 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.09□□□□□ -2.07
CSMD3Q7Z407 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC2.09□□□□□ -2.07
CSMD3Q7Z407 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.09□□□□□ -2.07
CSMD3Q7Z407 AC044913.1-201ENST00000557200 430 ntBASIC2.09□□□□□ -2.07
CSMD3Q7Z407 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC2.09□□□□□ -2.07
CSMD3Q7Z407 AP005262.1-201ENST00000582646 997 ntBASIC2.09□□□□□ -2.07
CSMD3Q7Z407 AC007318.2-201ENST00000620999 243 ntBASIC2.09□□□□□ -2.07
CSMD3Q7Z407 PLCE1P1-201ENST00000622094 305 ntBASIC2.09□□□□□ -2.07
CSMD3Q7Z407 GDA-209ENST00000545168 5362 ntTSL 2 BASIC2.09□□□□□ -2.07
CSMD3Q7Z407 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CSMD3Q7Z407 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.09□□□□□ -2.07
CSMD3Q7Z407 RNA5SP104-201ENST00000410989 118 ntBASIC2.09□□□□□ -2.07
CSMD3Q7Z407 AL356968.1-201ENST00000416622 474 ntBASIC2.09□□□□□ -2.07
CSMD3Q7Z407 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC2.09□□□□□ -2.07
CSMD3Q7Z407 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.09□□□□□ -2.07
CSMD3Q7Z407 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.09□□□□□ -2.07
CSMD3Q7Z407 AC008264.1-201ENST00000447612 367 ntBASIC2.09□□□□□ -2.07
CSMD3Q7Z407 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.09□□□□□ -2.07
CSMD3Q7Z407 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.09□□□□□ -2.07
CSMD3Q7Z407 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.09□□□□□ -2.07
CSMD3Q7Z407 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.09□□□□□ -2.07
CSMD3Q7Z407 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms