Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RNU6-441P-201ENST00000384545 106 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 RNU6-906P-201ENST00000384700 70 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 SNORA40.2-201ENST00000390847 128 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 OFD1P18Y-201ENST00000420889 959 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 RBMY1KP-201ENST00000423480 476 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 EIF1P3-201ENST00000423841 334 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 Z93242.1-201ENST00000427102 353 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 AL035246.1-201ENST00000433554 1255 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 ELOCP18-201ENST00000434209 337 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 B3GNT2P1-201ENST00000434960 952 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 GTF2IP7-202ENST00000436677 309 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 ANP32BP2-201ENST00000454525 545 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 PTGES3P5-201ENST00000455109 434 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 NF1P3-201ENST00000457709 450 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 AC020898.1-201ENST00000474167 787 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 AC106872.2-201ENST00000494303 480 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 AC006499.6-201ENST00000511169 607 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 C1GALT1P3-201ENST00000522049 819 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 MTND6P33-201ENST00000571794 183 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 MTND3P13-201ENST00000574391 343 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 MIR3912-201ENST00000577566 105 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 VN1R83P-201ENST00000595685 445 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 DPRXP5-201ENST00000604662 539 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 AC090425.2-201ENST00000608818 501 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 AL138721.1-201ENST00000616756 179 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 AC099786.3-201ENST00000565735 1410 ntBASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NUP54Q7Z3B4 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AP005901.5-201ENST00000545779 1796 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 RNA5SP28-201ENST00000363841 119 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 RNU1-85P-201ENST00000364127 164 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 RNA5SP175-201ENST00000364275 119 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 RNU4-68P-201ENST00000364314 141 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 snoZ40.1-201ENST00000364540 72 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 RNA5SP513-201ENST00000364648 118 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 SNORD116-23-201ENST00000384645 92 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 RPL31P1-201ENST00000398116 372 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 VN1R8P-201ENST00000407739 893 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AC016397.1-201ENST00000412463 242 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AL139095.3-201ENST00000419672 1203 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AC009237.2-201ENST00000421358 284 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AL592293.2-201ENST00000422292 996 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 RPL18P10-201ENST00000425606 538 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 DPRXP1-201ENST00000426312 460 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AC073335.1-201ENST00000427776 363 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 MTCO1P54-201ENST00000430139 712 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 EEF1A1P39-201ENST00000440791 250 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AC079776.3-201ENST00000450665 370 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AC011276.1-201ENST00000469688 323 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AC025674.1-201ENST00000507074 324 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 PHBP17-201ENST00000528576 541 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AGGF1P6-201ENST00000569213 976 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AL121834.1-201ENST00000572284 509 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms