Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
C11orf88Q6PI97 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
C11orf88Q6PI97 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 RNU1-15P-201ENST00000353977 144 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 SUGT1P1-201ENST00000379514 476 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 AL590762.2-201ENST00000395798 571 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 ARF4P3-201ENST00000397387 509 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 RNU2-15P-201ENST00000410692 191 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 AC092447.6-201ENST00000414578 210 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 AC016831.4-201ENST00000438302 307 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 AL034418.1-201ENST00000448675 860 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 AL162591.2-201ENST00000449634 317 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 AC234781.3-201ENST00000452540 973 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 NECAP1P2-201ENST00000455668 727 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 RPL7P1-201ENST00000468161 747 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 AL024509.2-201ENST00000493462 493 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 AC108941.1-201ENST00000502853 530 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 PARP4P3-201ENST00000510265 317 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 HNRNPKP5-201ENST00000515300 253 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 OR5M7P-201ENST00000526140 972 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 HIGD1AP10-201ENST00000527837 282 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 AC118942.1-201ENST00000529674 1035 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 YWHAZP1-201ENST00000556286 722 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 AL022067.1-201ENST00000602426 454 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 AC020634.1-201ENST00000608701 549 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 AC009237.15-201ENST00000610252 501 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 AC007497.1-201ENST00000610421 561 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 XIST_intron.1-201ENST00000619444 68 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 AC092650.2-201ENST00000619984 902 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.88□□□□□ -1.79
C11orf88Q6PI97 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
C11orf88Q6PI97 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 AC244517.1-201ENST00000606030 2086 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 Y_RNA.25-201ENST00000362528 102 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 DEFB109C-201ENST00000382575 264 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 DEFB109B-201ENST00000382656 264 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 GTF2IP23-201ENST00000423746 351 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 AC079780.1-201ENST00000428259 207 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 USP9YP31-201ENST00000431405 881 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 NEK4P1-201ENST00000433383 879 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 RPL7P52-201ENST00000449200 742 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 HMGN2P16-201ENST00000456802 261 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 AC007537.2-201ENST00000472093 511 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 RN7SL860P-201ENST00000473738 223 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 AC104982.1-201ENST00000478775 574 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 IGLV2-34-201ENST00000490007 283 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 AC027309.2-201ENST00000520566 192 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 LARP7P2-201ENST00000575306 125 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 SNORD84-203ENST00000584275 78 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.87□□□□□ -1.79
C11orf88Q6PI97 AL606834.3-201ENST00000602615 496 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 AP001521.1-201ENST00000609150 300 ntBASIC3.87□□□□□ -1.79
C11orf88Q6PI97 AL031666.3-201ENST00000609320 1006 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms