Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AL133270.1-201ENST00000402635 279 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 RNA5SP39-201ENST00000411245 120 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 AL591848.1-201ENST00000413092 322 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC38Q502W7 AL590762.4-201ENST00000425885 253 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 AL035410.1-201ENST00000427409 427 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC38Q502W7 AL356276.2-201ENST00000435919 558 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 MTCYBP34-201ENST00000439552 670 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 AL109741.2-201ENST00000455561 343 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 RPS15AP17-201ENST00000470598 390 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 AC146944.2-203ENST00000502493 354 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 AC114981.1-201ENST00000503897 678 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC38Q502W7 AC093767.1-201ENST00000504523 156 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 AC139495.1-202ENST00000513164 354 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 RNU2-30P-201ENST00000516209 141 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 AP000926.4-201ENST00000527351 454 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 DEFB109D-201ENST00000529497 240 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC38Q502W7 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC38Q502W7 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 HSPE1P3-201ENST00000559254 309 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 AC002400.1-201ENST00000569310 726 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 MIR3667-201ENST00000581025 74 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 AC021171.1-201ENST00000603137 706 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 AC025588.3-201ENST00000604182 274 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 RNA5SP108-201ENST00000605921 117 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 AL139418.1-201ENST00000613613 177 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 AL354976.1-201ENST00000613843 387 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 Z99129.2-201ENST00000619967 314 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 AC067852.7-201ENST00000623270 535 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 AP003485.2-201ENST00000623636 610 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 AC019226.2-201ENST00000625973 424 ntBASIC4.71□□□□□ -1.66
CCDC38Q502W7 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC38Q502W7 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC38Q502W7 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC38Q502W7 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC38Q502W7 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CCDC38Q502W7 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC38Q502W7 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC38Q502W7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC38Q502W7 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC38Q502W7 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC38Q502W7 AC025031.4-201ENST00000621248 3271 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC38Q502W7 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC38Q502W7 RN7SKP149-201ENST00000363008 344 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 RNU6-730P-201ENST00000383954 104 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC38Q502W7 RPL23AP29-201ENST00000397284 453 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 RNA5SP113-201ENST00000410486 84 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 TPT1P2-201ENST00000413105 503 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 AL391219.1-201ENST00000422570 483 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 AC005517.2-201ENST00000424673 553 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 MTND5P25-201ENST00000430499 799 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 RPS6P15-201ENST00000431996 751 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 NRBF2P3-201ENST00000432731 865 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 H2AFZP5-201ENST00000446960 382 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 NDUFS5P3-201ENST00000450668 321 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 RPL35AP28-201ENST00000459730 331 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 AC231760.1-201ENST00000498002 260 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 155.1 ms