Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 SDAD1P1-202ENST00000524156 2051 ntBASIC5.75□□□□□ -1.49
CCDC144BQ3MJ40 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 OR11H5P-202ENST00000641612 1325 ntBASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 RNU1-32P-201ENST00000363937 159 ntBASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 RNA5SP505-201ENST00000364748 108 ntBASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 MIR1271-201ENST00000408537 86 ntBASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 AC109780.2-201ENST00000413467 845 ntBASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 UBE2V1P3-201ENST00000439651 417 ntBASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 AC004980.3-201ENST00000447046 365 ntBASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 AC010350.1-201ENST00000504908 231 ntBASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 AC010625.1-201ENST00000511296 403 ntBASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 AC105031.1-201ENST00000518550 476 ntBASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 OR5AP1P-201ENST00000529730 940 ntBASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 OR8L1P-201ENST00000534005 955 ntBASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 AC091489.2-201ENST00000566263 604 ntBASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 AC008759.1-201ENST00000589783 983 ntBASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 RSL24D1P11-201ENST00000591045 491 ntBASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 AC103792.1-201ENST00000603591 919 ntBASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 AC087752.4-201ENST00000605911 462 ntBASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 AC073968.1-201ENST00000618594 637 ntBASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 AC022106.2-201ENST00000620114 757 ntBASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 AC012414.7-202ENST00000622705 1090 ntBASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.74□□□□□ -1.49
CCDC144BQ3MJ40 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 AC079741.1-201ENST00000321498 212 ntBASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 RNU6-289P-201ENST00000364093 107 ntBASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 SNORD116-4-201ENST00000384733 96 ntBASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 MTND4LP20-201ENST00000402379 270 ntBASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 AL359643.1-201ENST00000404109 423 ntBASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 BX323845.1-201ENST00000432417 179 ntBASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 AL353706.1-201ENST00000436728 494 ntBASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 LSM1P1-201ENST00000438629 273 ntBASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 AC127537.2-201ENST00000439258 465 ntBASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 AL450263.2-201ENST00000439400 589 ntBASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 OR7E125P-201ENST00000443450 846 ntBASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 AL356981.1-201ENST00000454879 684 ntBASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 BX322784.1-201ENST00000455793 1077 ntBASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 RN7SL481P-201ENST00000477764 299 ntBASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 GAPDHP56-201ENST00000506031 988 ntBASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 AC005798.1-201ENST00000513715 387 ntBASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 AC060788.1-201ENST00000521318 469 ntBASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 AP006289.1-201ENST00000538089 277 ntBASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 MIR3667-201ENST00000581025 74 ntBASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 AC209154.1-201ENST00000582156 337 ntBASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 AP000403.1-201ENST00000603349 851 ntBASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 AC018695.5-201ENST00000605872 315 ntBASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 MIR6780A-201ENST00000615089 68 ntBASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC144BQ3MJ40 AC092656.1-203ENST00000624134 423 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms